Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 AP001981.2-201ENST00000603241 418 ntBASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 AP004372.1-201ENST00000604842 844 ntBASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 AL445423.1-201ENST00000609941 536 ntBASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 AC090246.1-201ENST00000616499 426 ntBASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 AC092192.1-201ENST00000633154 1018 ntBASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 PABPC1P6-201ENST00000445594 1829 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 MTND5P29-201ENST00000458676 1807 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 AL132640.2-201ENST00000559968 1698 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 AC010132.2-201ENST00000295493 1043 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 RNU4-51P-201ENST00000364206 140 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 AL121835.1-201ENST00000404250 354 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 RNU2-17P-201ENST00000410290 190 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 AC004022.2-201ENST00000413824 193 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 EIF4A1P1-201ENST00000420241 934 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 MTND4LP11-201ENST00000422184 280 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 PNRC2P1-201ENST00000423940 420 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 AC012075.1-201ENST00000436549 580 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 RPS12P17-201ENST00000438591 377 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 RPS7P3-201ENST00000443360 580 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 TPTE2P6-202ENST00000445572 1007 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 MTND4P18-201ENST00000447010 465 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 CCRL1P1-201ENST00000449542 1053 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 VN1R32P-201ENST00000452234 905 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 AL606490.1-201ENST00000452266 765 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 AC234781.3-201ENST00000452540 973 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 RN7SL329P-201ENST00000467740 299 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 AC008953.1-201ENST00000497334 318 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 NDUFB5P1-201ENST00000508134 564 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 AC116353.3-201ENST00000511215 249 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 RNU6-759P-201ENST00000516740 103 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 SNORA43.3-201ENST00000517240 103 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 PTK2-220ENST00000520151 573 ntTSL 4 BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 AL163642.2-201ENST00000604722 1019 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 RBM11P1-201ENST00000604951 799 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 AC239868.4-201ENST00000608318 671 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 AP000254.1-201ENST00000609934 520 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 U1.34-201ENST00000618578 162 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 AL157770.1-201ENST00000623049 439 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 AP003072.4-201ENST00000624580 310 ntBASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.62□□□□□ -1.35
PDLIM7Q9NR12 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 AC011503.2-201ENST00000594230 1500 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms