Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC42Q96M95 OR52B5P-201ENST00000435337 951 ntBASIC5.23□□□□□ -1.57
CCDC42Q96M95 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC42Q96M95 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC42Q96M95 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC42Q96M95 AL136038.1-201ENST00000497246 351 ntBASIC5.23□□□□□ -1.57
CCDC42Q96M95 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC42Q96M95 RNA5SP362-201ENST00000516048 118 ntBASIC5.23□□□□□ -1.57
CCDC42Q96M95 RNA5SP43-201ENST00000516559 110 ntBASIC5.23□□□□□ -1.57
CCDC42Q96M95 RNU6-709P-201ENST00000517257 104 ntBASIC5.23□□□□□ -1.57
CCDC42Q96M95 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CCDC42Q96M95 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC42Q96M95 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC42Q96M95 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC42Q96M95 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC42Q96M95 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC42Q96M95 AC015982.1-201ENST00000608113 465 ntBASIC5.23□□□□□ -1.57
CCDC42Q96M95 OR52B5P-202ENST00000641118 1110 ntBASIC5.23□□□□□ -1.57
CCDC42Q96M95 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC42Q96M95 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC42Q96M95 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC42Q96M95 AC000123.3-201ENST00000624029 4975 ntBASIC5.23□□□□□ -1.57
CCDC42Q96M95 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CCDC42Q96M95 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
CCDC42Q96M95 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC42Q96M95 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
CCDC42Q96M95 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC42Q96M95 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC42Q96M95 AL445487.1-201ENST00000415694 1580 ntBASIC5.22□□□□□ -1.57
CCDC42Q96M95 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC42Q96M95 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC42Q96M95 BMS1P3-201ENST00000372011 932 ntBASIC5.22□□□□□ -1.57
CCDC42Q96M95 RN7SKP247-201ENST00000411094 308 ntBASIC5.22□□□□□ -1.57
CCDC42Q96M95 Z68694.1-201ENST00000413929 841 ntBASIC5.22□□□□□ -1.57
CCDC42Q96M95 FABP7P1-201ENST00000424004 391 ntBASIC5.22□□□□□ -1.57
CCDC42Q96M95 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC42Q96M95 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC42Q96M95 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC42Q96M95 AL451139.1-201ENST00000434718 346 ntBASIC5.22□□□□□ -1.57
CCDC42Q96M95 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC42Q96M95 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC42Q96M95 RPL34P20-201ENST00000442771 351 ntBASIC5.22□□□□□ -1.57
CCDC42Q96M95 AC000111.2-201ENST00000448200 210 ntBASIC5.22□□□□□ -1.57
CCDC42Q96M95 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC42Q96M95 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC42Q96M95 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC42Q96M95 AC091544.1-201ENST00000484702 348 ntBASIC5.22□□□□□ -1.57
CCDC42Q96M95 RN7SL97P-201ENST00000486780 299 ntBASIC5.22□□□□□ -1.57
CCDC42Q96M95 AC024558.1-201ENST00000505008 528 ntBASIC5.22□□□□□ -1.57
CCDC42Q96M95 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC42Q96M95 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.22□□□□□ -1.57
CCDC42Q96M95 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC42Q96M95 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC42Q96M95 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.22□□□□□ -1.57
CCDC42Q96M95 AC090022.1-201ENST00000546569 311 ntBASIC5.22□□□□□ -1.57
CCDC42Q96M95 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC42Q96M95 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC42Q96M95 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC42Q96M95 AL451049.1-201ENST00000608672 497 ntBASIC5.22□□□□□ -1.57
CCDC42Q96M95 AC126915.2-201ENST00000610957 190 ntBASIC5.22□□□□□ -1.57
CCDC42Q96M95 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC42Q96M95 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CCDC42Q96M95 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC42Q96M95 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC42Q96M95 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC42Q96M95 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC42Q96M95 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC42Q96M95 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
CCDC42Q96M95 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.21□□□□□ -1.57
CCDC42Q96M95 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
CCDC42Q96M95 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
CCDC42Q96M95 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.21□□□□□ -1.58
CCDC42Q96M95 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CCDC42Q96M95 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC42Q96M95 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC42Q96M95 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CCDC42Q96M95 Z97832.1-201ENST00000402490 328 ntBASIC5.21□□□□□ -1.58
CCDC42Q96M95 AL021331.1-201ENST00000402817 582 ntBASIC5.21□□□□□ -1.58
CCDC42Q96M95 TBCAP2-201ENST00000416175 326 ntBASIC5.21□□□□□ -1.58
CCDC42Q96M95 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC42Q96M95 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC42Q96M95 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.21□□□□□ -1.58
CCDC42Q96M95 AC090589.1-201ENST00000473109 362 ntBASIC5.21□□□□□ -1.58
CCDC42Q96M95 RPL21P6-201ENST00000479171 504 ntBASIC5.21□□□□□ -1.58
CCDC42Q96M95 AC090142.2-201ENST00000483263 416 ntBASIC5.21□□□□□ -1.58
CCDC42Q96M95 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC42Q96M95 RN7SL558P-201ENST00000497468 299 ntBASIC5.21□□□□□ -1.58
CCDC42Q96M95 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC42Q96M95 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.21□□□□□ -1.58
CCDC42Q96M95 AC079075.1-201ENST00000559543 878 ntBASIC5.21□□□□□ -1.58
CCDC42Q96M95 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.21□□□□□ -1.58
CCDC42Q96M95 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC42Q96M95 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC42Q96M95 AC234782.5-201ENST00000617723 324 ntBASIC5.21□□□□□ -1.58
CCDC42Q96M95 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC42Q96M95 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
CCDC42Q96M95 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC42Q96M95 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC42Q96M95 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
CCDC42Q96M95 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms