Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 AL391261.1-201ENST00000555712 1479 ntBASIC8.26□□□□□ -1.09
RC3H1Q5TC82 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 AL023806.3-201ENST00000638502 2704 ntBASIC8.26□□□□□ -1.09
RC3H1Q5TC82 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 CCT4P2-201ENST00000233836 1548 ntBASIC8.26□□□□□ -1.09
RC3H1Q5TC82 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 RNU6-534P-201ENST00000364877 106 ntBASIC8.26□□□□□ -1.09
RC3H1Q5TC82 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 Y_RNA.394-201ENST00000383942 103 ntBASIC8.26□□□□□ -1.09
RC3H1Q5TC82 MIR199B-201ENST00000384849 110 ntBASIC8.26□□□□□ -1.09
RC3H1Q5TC82 SNORA17A-201ENST00000391185 133 ntBASIC8.26□□□□□ -1.09
RC3H1Q5TC82 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 RN7SKP281-201ENST00000410472 352 ntBASIC8.26□□□□□ -1.09
RC3H1Q5TC82 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 SPRYD7P1-201ENST00000443861 570 ntBASIC8.26□□□□□ -1.09
RC3H1Q5TC82 AL512593.1-201ENST00000444758 779 ntBASIC8.26□□□□□ -1.09
RC3H1Q5TC82 AL591363.1-201ENST00000450091 483 ntBASIC8.26□□□□□ -1.09
RC3H1Q5TC82 USP9YP12-201ENST00000450481 570 ntBASIC8.26□□□□□ -1.09
RC3H1Q5TC82 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 OR6C5P-201ENST00000452388 923 ntBASIC8.26□□□□□ -1.09
RC3H1Q5TC82 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 AP001429.1-201ENST00000602568 530 ntBASIC8.26□□□□□ -1.09
RC3H1Q5TC82 FAM27E2-201ENST00000619668 403 ntBASIC8.26□□□□□ -1.09
RC3H1Q5TC82 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 AC129778.1-202ENST00000623812 261 ntBASIC8.26□□□□□ -1.09
RC3H1Q5TC82 SNORA17.5-201ENST00000630429 132 ntBASIC8.26□□□□□ -1.09
RC3H1Q5TC82 AL591379.1-207ENST00000635982 261 ntBASIC8.26□□□□□ -1.09
RC3H1Q5TC82 AMYH02020865.1-205ENST00000636189 261 ntBASIC8.26□□□□□ -1.09
RC3H1Q5TC82 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 AC093278.2-201ENST00000564956 2485 ntBASIC8.26□□□□□ -1.09
RC3H1Q5TC82 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC8.26□□□□□ -1.09
RC3H1Q5TC82 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 Y_RNA.89-201ENST00000363031 102 ntBASIC8.25□□□□□ -1.09
RC3H1Q5TC82 Y_RNA.144-201ENST00000363521 113 ntBASIC8.25□□□□□ -1.09
RC3H1Q5TC82 Y_RNA.216-201ENST00000364205 93 ntBASIC8.25□□□□□ -1.09
RC3H1Q5TC82 Y_RNA.279-201ENST00000364763 95 ntBASIC8.25□□□□□ -1.09
RC3H1Q5TC82 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 RPS27AP11-201ENST00000402798 447 ntBASIC8.25□□□□□ -1.09
RC3H1Q5TC82 TAF13P2-201ENST00000416876 286 ntBASIC8.25□□□□□ -1.09
RC3H1Q5TC82 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 IGLV3-4-201ENST00000432300 244 ntBASIC8.25□□□□□ -1.09
RC3H1Q5TC82 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 MTCYBP45-201ENST00000435243 565 ntBASIC8.25□□□□□ -1.09
RC3H1Q5TC82 ATP6V1E1P1-201ENST00000439215 681 ntBASIC8.25□□□□□ -1.09
RC3H1Q5TC82 RPS4XP4-201ENST00000443195 763 ntBASIC8.25□□□□□ -1.09
RC3H1Q5TC82 PNPLA4P1-201ENST00000458328 305 ntBASIC8.25□□□□□ -1.09
RC3H1Q5TC82 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 PABPC1P1-201ENST00000506347 591 ntBASIC8.25□□□□□ -1.09
RC3H1Q5TC82 AC111000.3-201ENST00000508057 576 ntBASIC8.25□□□□□ -1.09
RC3H1Q5TC82 FGF7P4-201ENST00000509595 295 ntBASIC8.25□□□□□ -1.09
RC3H1Q5TC82 IGHV4-55-201ENST00000520889 368 ntBASIC8.25□□□□□ -1.09
RC3H1Q5TC82 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 OR4A12P-201ENST00000530847 918 ntBASIC8.25□□□□□ -1.09
RC3H1Q5TC82 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 PLEKHA3P1-201ENST00000598554 894 ntBASIC8.25□□□□□ -1.09
RC3H1Q5TC82 AC068790.7-201ENST00000602347 528 ntBASIC8.25□□□□□ -1.09
RC3H1Q5TC82 COX6CP4-201ENST00000605798 228 ntBASIC8.25□□□□□ -1.09
RC3H1Q5TC82 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms