Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC079097.1-201ENST00000512187 1399 ntBASIC4.28□□□□□ -1.72
LRRK2Q5S007 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.28□□□□□ -1.72
LRRK2Q5S007 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LRRK2Q5S007 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LRRK2Q5S007 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LRRK2Q5S007 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LRRK2Q5S007 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.28□□□□□ -1.72
LRRK2Q5S007 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.28□□□□□ -1.72
LRRK2Q5S007 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.28□□□□□ -1.72
LRRK2Q5S007 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.28□□□□□ -1.72
LRRK2Q5S007 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.28□□□□□ -1.72
LRRK2Q5S007 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.28□□□□□ -1.72
LRRK2Q5S007 RPL36AP41-201ENST00000493820 306 ntBASIC4.28□□□□□ -1.72
LRRK2Q5S007 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.28□□□□□ -1.72
LRRK2Q5S007 AC006499.6-201ENST00000511169 607 ntBASIC4.28□□□□□ -1.72
LRRK2Q5S007 OR5D2P-201ENST00000524390 911 ntBASIC4.28□□□□□ -1.72
LRRK2Q5S007 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC4.28□□□□□ -1.72
LRRK2Q5S007 RN7SL435P-201ENST00000584418 282 ntBASIC4.28□□□□□ -1.72
LRRK2Q5S007 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.28□□□□□ -1.72
LRRK2Q5S007 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.28□□□□□ -1.72
LRRK2Q5S007 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LRRK2Q5S007 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.28□□□□□ -1.72
LRRK2Q5S007 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
LRRK2Q5S007 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.73
LRRK2Q5S007 PARN-201ENST00000341484 2100 ntTSL 2 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LRRK2Q5S007 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 AC079298.1-201ENST00000625026 1619 ntBASIC4.27□□□□□ -1.73
LRRK2Q5S007 AL442639.1-201ENST00000625030 1899 ntBASIC4.27□□□□□ -1.73
LRRK2Q5S007 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LRRK2Q5S007 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LRRK2Q5S007 SNORA73.1-201ENST00000363107 205 ntBASIC4.27□□□□□ -1.73
LRRK2Q5S007 REG1CP-206ENST00000447469 496 ntBASIC4.27□□□□□ -1.73
LRRK2Q5S007 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 RPS5P7-201ENST00000456664 608 ntBASIC4.27□□□□□ -1.73
LRRK2Q5S007 AC245028.2-201ENST00000458673 253 ntBASIC4.27□□□□□ -1.73
LRRK2Q5S007 RN7SL814P-201ENST00000487715 300 ntBASIC4.27□□□□□ -1.73
LRRK2Q5S007 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 SNORA74D-201ENST00000516404 141 ntBASIC4.27□□□□□ -1.73
LRRK2Q5S007 SNORA31.9-201ENST00000516429 84 ntBASIC4.27□□□□□ -1.73
LRRK2Q5S007 MIR2116-201ENST00000517221 80 ntBASIC4.27□□□□□ -1.73
LRRK2Q5S007 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 AF131215.7-201ENST00000602443 707 ntBASIC4.27□□□□□ -1.73
LRRK2Q5S007 MIR6867-201ENST00000610636 67 ntBASIC4.27□□□□□ -1.73
LRRK2Q5S007 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LRRK2Q5S007 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LRRK2Q5S007 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LRRK2Q5S007 MAPK10-263ENST00000641052 4307 ntBASIC4.27□□□□□ -1.73
LRRK2Q5S007 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LRRK2Q5S007 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 AL034549.2-201ENST00000618285 3373 ntBASIC4.27□□□□□ -1.73
LRRK2Q5S007 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LRRK2Q5S007 AL592148.3-201ENST00000608771 2646 ntBASIC4.27□□□□□ -1.73
LRRK2Q5S007 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LRRK2Q5S007 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LRRK2Q5S007 RN7SL810P-201ENST00000493031 276 ntBASIC4.27□□□□□ -1.73
LRRK2Q5S007 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 MTCO1P49-201ENST00000523429 802 ntBASIC4.27□□□□□ -1.73
LRRK2Q5S007 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 MIR3138-201ENST00000585238 82 ntBASIC4.27□□□□□ -1.73
LRRK2Q5S007 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LRRK2Q5S007 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
LRRK2Q5S007 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.26□□□□□ -1.73
LRRK2Q5S007 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
LRRK2Q5S007 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.26□□□□□ -1.73
LRRK2Q5S007 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LRRK2Q5S007 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.26□□□□□ -1.73
LRRK2Q5S007 UGT2B24P-201ENST00000514441 1597 ntBASIC4.26□□□□□ -1.73
LRRK2Q5S007 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRRK2Q5S007 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LRRK2Q5S007 PPIAP31-201ENST00000405422 495 ntBASIC4.26□□□□□ -1.73
LRRK2Q5S007 RPS17P8-201ENST00000434525 335 ntBASIC4.26□□□□□ -1.73
LRRK2Q5S007 RPS3AP54-201ENST00000435535 734 ntBASIC4.26□□□□□ -1.73
LRRK2Q5S007 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.26□□□□□ -1.73
LRRK2Q5S007 OR2A3P-201ENST00000493774 953 ntBASIC4.26□□□□□ -1.73
LRRK2Q5S007 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.26□□□□□ -1.73
LRRK2Q5S007 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
LRRK2Q5S007 OR4A43P-201ENST00000532938 908 ntBASIC4.26□□□□□ -1.73
LRRK2Q5S007 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.26□□□□□ -1.73
LRRK2Q5S007 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LRRK2Q5S007 AC233968.1-201ENST00000611212 1300 ntBASIC4.26□□□□□ -1.73
LRRK2Q5S007 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms