| FOXC1 | Q12948 | RPL7-201 | ENST00000352983 | 1101 nt | APPRIS P1 TSL 1 (best) BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | RNU5E-1-201 | ENST00000362477 | 120 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | RNU6-492P-201 | ENST00000363035 | 104 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | RNU6-774P-201 | ENST00000363238 | 107 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | RNA5SP114-201 | ENST00000363780 | 113 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | RNU6-1040P-201 | ENST00000383974 | 107 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | Y_RNA.512-201 | ENST00000384518 | 102 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | IGKC-201 | ENST00000390237 | 523 nt | APPRIS P1 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | TRBV19-201 | ENST00000390393 | 552 nt | APPRIS P1 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | RN7SKP268-201 | ENST00000411107 | 316 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AC004946.1-201 | ENST00000421825 | 751 nt | TSL 3 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | SPATA20P1-201 | ENST00000423089 | 438 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AC139712.2-201 | ENST00000424302 | 339 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | OR13C7-201 | ENST00000424348 | 959 nt | APPRIS P1 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | RPL3P11-201 | ENST00000434028 | 1146 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AL121872.1-202 | ENST00000435867 | 308 nt | TSL 5 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AC004869.2-201 | ENST00000436501 | 229 nt | TSL 3 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AC097527.1-201 | ENST00000437031 | 530 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AL359672.1-201 | ENST00000442302 | 409 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AL121871.1-201 | ENST00000443413 | 436 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AC092601.1-201 | ENST00000444526 | 383 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AL357873.1-201 | ENST00000449215 | 282 nt | TSL 3 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | HMGB1P7-201 | ENST00000450921 | 612 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | MIR4435-2HG-213 | ENST00000451884 | 423 nt | TSL 3 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AC093799.1-201 | ENST00000452411 | 499 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | FGF12-AS3-201 | ENST00000452848 | 291 nt | TSL 3 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AL356010.1-201 | ENST00000456364 | 102 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AC110749.1-201 | ENST00000462007 | 357 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AP003385.3-201 | ENST00000472498 | 287 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | CFLAR-223 | ENST00000479953 | 1230 nt | TSL 2 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | TECRP2-201 | ENST00000503270 | 928 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AC091849.1-201 | ENST00000509920 | 121 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AC010255.3-204 | ENST00000514637 | 454 nt | TSL 2 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | NARSP2-201 | ENST00000518524 | 679 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | CASC11-203 | ENST00000519071 | 791 nt | TSL 3 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | RPL7P20-201 | ENST00000520308 | 745 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | GABARAPL1-212 | ENST00000543602 | 653 nt | TSL 5 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | ARL1-211 | ENST00000551828 | 776 nt | TSL 5 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AC068722.1-202 | ENST00000559600 | 655 nt | TSL 3 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AC009117.3-202 | ENST00000563825 | 557 nt | TSL 4 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AC009117.2-201 | ENST00000565374 | 504 nt | TSL 3 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AC025272.1-201 | ENST00000569661 | 483 nt | TSL 2 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AC099489.2-201 | ENST00000574976 | 260 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | MIR4312-201 | ENST00000579909 | 76 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AC006504.5-201 | ENST00000588122 | 655 nt | TSL 5 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AC098617.1-215 | ENST00000594798 | 1152 nt | TSL 5 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AC104695.3-201 | ENST00000604052 | 296 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AC011626.1-201 | ENST00000604710 | 562 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AL390877.1-201 | ENST00000605704 | 214 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | MIR6071-201 | ENST00000616741 | 78 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | BIRC6-AS2-201 | ENST00000623382 | 589 nt | TSL 2 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | TEX41-254 | ENST00000626394 | 423 nt | TSL 5 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | LINC01232-205 | ENST00000630421 | 1002 nt | TSL 1 (best) BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | LAMTOR5-AS1-248 | ENST00000630488 | 703 nt | TSL 5 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | PAPOLG-201 | ENST00000238714 | 4263 nt | APPRIS P1 TSL 1 (best) BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | KLHL8-203 | ENST00000498875 | 5175 nt | TSL 1 (best) BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | CPSF7-206 | ENST00000448745 | 1749 nt | APPRIS ALT1 TSL 5 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | CDH13-202 | ENST00000428848 | 2195 nt | APPRIS ALT2 TSL 2 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | MGAT4C-202 | ENST00000548651 | 2159 nt | APPRIS P1 TSL 5 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | ASNSP3-201 | ENST00000451989 | 1306 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AL109811.1-201 | ENST00000452378 | 2682 nt | TSL 2 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AC009148.1-201 | ENST00000570148 | 2693 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | CEACAM6-201 | ENST00000199764 | 2700 nt | APPRIS P1 TSL 1 (best) BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AC006058.1-201 | ENST00000568686 | 5067 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AKR1D1-201 | ENST00000242375 | 2347 nt | APPRIS P1 TSL 1 (best) BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AOAH-208 | ENST00000612871 | 2336 nt | APPRIS ALT2 TSL 2 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | DAAM1-201 | ENST00000360909 | 4227 nt | APPRIS ALT2 TSL 1 (best) BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | TC2N-202 | ENST00000360594 | 3751 nt | APPRIS P1 TSL 1 (best) BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AL354733.2-209 | ENST00000589233 | 1434 nt | TSL 2 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | CHRDL1-201 | ENST00000372042 | 1934 nt | APPRIS ALT1 TSL 2 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AC005722.2-201 | ENST00000577087 | 3370 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | KCNK2-201 | ENST00000391894 | 1491 nt | APPRIS P3 TSL 1 (best) BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AL031118.1-201 | ENST00000607727 | 2955 nt | BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | ACVR1-201 | ENST00000263640 | 3047 nt | APPRIS P1 TSL 1 (best) BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | INTS12-211 | ENST00000618810 | 1502 nt | APPRIS P1 TSL 5 BASIC | 7.17 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | AL157831.2-201 | ENST00000564681 | 3095 nt | BASIC | 7.16 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | UTY-205 | ENST00000382896 | 6661 nt | APPRIS ALT2 TSL 1 (best) BASIC | 7.16 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | UTY-211 | ENST00000540140 | 6652 nt | TSL 1 (best) BASIC | 7.16 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | UTY-214 | ENST00000617789 | 6682 nt | APPRIS ALT2 TSL 1 (best) BASIC | 7.16 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | ZNF716-201 | ENST00000420713 | 5197 nt | APPRIS P1 TSL 4 BASIC | 7.16 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | SORCS1-203 | ENST00000369698 | 2638 nt | TSL 5 BASIC | 7.16 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | TCP11-207 | ENST00000418521 | 1575 nt | APPRIS ALT2 TSL 5 BASIC | 7.16 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | PARN-201 | ENST00000341484 | 2100 nt | TSL 2 BASIC | 7.16 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | LINC01105-204 | ENST00000444416 | 2695 nt | TSL 2 BASIC | 7.16 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | NAA16-201 | ENST00000379406 | 4347 nt | APPRIS P1 TSL 1 (best) BASIC | 7.16 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | CRNKL1-201 | ENST00000377327 | 4370 nt | TSL 1 (best) BASIC | 7.16 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | STAT4-201 | ENST00000358470 | 2769 nt | APPRIS P1 TSL 1 (best) BASIC | 7.16 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | CHODL-203 | ENST00000400127 | 2239 nt | TSL 1 (best) BASIC | 7.16 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | ERMAP-202 | ENST00000372514 | 3369 nt | APPRIS P2 TSL 1 (best) BASIC | 7.16 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | OSGIN2-201 | ENST00000297438 | 4209 nt | TSL 1 (best) BASIC | 7.16 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | SNX16-202 | ENST00000353788 | 3032 nt | TSL 1 (best) BASIC | 7.16 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | PHIP-201 | ENST00000275034 | 10460 nt | APPRIS P1 TSL 1 (best) BASIC | 7.16 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | DEPDC1B-201 | ENST00000265036 | 2499 nt | APPRIS P1 TSL 1 (best) BASIC | 7.16 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | LTBP1-202 | ENST00000404525 | 5092 nt | APPRIS ALT2 TSL 1 (best) BASIC | 7.16 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | DPH5-201 | ENST00000342173 | 1143 nt | APPRIS ALT1 TSL 1 (best) BASIC | 7.16 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | Y_RNA.25-201 | ENST00000362528 | 102 nt | BASIC | 7.16 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | RNU6-770P-201 | ENST00000363929 | 105 nt | BASIC | 7.16 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | U3.12-201 | ENST00000364498 | 214 nt | BASIC | 7.16 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | Y_RNA.252-201 | ENST00000364556 | 101 nt | BASIC | 7.16 | □□□□□ -1.26 | | |
| FOXC1 | Q12948 | RNY1P14-201 | ENST00000384426 | 108 nt | BASIC | 7.16 | □□□□□ -1.26 | | |