Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CYCSP53-201ENST00000455540 265 ntBASIC5.12□□□□□ -1.59
CDH13P55290 RPS4XP12-201ENST00000461747 709 ntBASIC5.12□□□□□ -1.59
CDH13P55290 RN7SL189P-201ENST00000468631 289 ntBASIC5.12□□□□□ -1.59
CDH13P55290 RPL35AP19-201ENST00000469425 329 ntBASIC5.12□□□□□ -1.59
CDH13P55290 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH13P55290 RNU6-513P-201ENST00000516104 104 ntBASIC5.12□□□□□ -1.59
CDH13P55290 TMEM97P2-201ENST00000517841 403 ntBASIC5.12□□□□□ -1.59
CDH13P55290 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH13P55290 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH13P55290 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.12□□□□□ -1.59
CDH13P55290 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH13P55290 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.12□□□□□ -1.59
CDH13P55290 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH13P55290 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH13P55290 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH13P55290 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH13P55290 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH13P55290 RN7SL708P-201ENST00000580952 299 ntBASIC5.12□□□□□ -1.59
CDH13P55290 AC010245.2-201ENST00000606908 1167 ntBASIC5.12□□□□□ -1.59
CDH13P55290 RN7SL787P-201ENST00000613000 284 ntBASIC5.12□□□□□ -1.59
CDH13P55290 AC073575.2-201ENST00000614212 627 ntBASIC5.12□□□□□ -1.59
CDH13P55290 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH13P55290 AC103703.1-201ENST00000634783 663 ntBASIC5.12□□□□□ -1.59
CDH13P55290 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH13P55290 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
CDH13P55290 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.12□□□□□ -1.59
CDH13P55290 AC007382.1-201ENST00000624376 2618 ntBASIC5.12□□□□□ -1.59
CDH13P55290 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH13P55290 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH13P55290 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.12□□□□□ -1.59
CDH13P55290 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CDH13P55290 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH13P55290 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH13P55290 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH13P55290 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
CDH13P55290 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CDH13P55290 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH13P55290 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
CDH13P55290 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH13P55290 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CDH13P55290 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH13P55290 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CDH13P55290 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH13P55290 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH13P55290 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH13P55290 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH13P55290 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
CDH13P55290 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH13P55290 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH13P55290 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH13P55290 RNA5SP335-201ENST00000363817 110 ntBASIC5.11□□□□□ -1.59
CDH13P55290 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH13P55290 MIR105-1-201ENST00000385222 81 ntBASIC5.11□□□□□ -1.59
CDH13P55290 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH13P55290 PCNPP4-201ENST00000414817 517 ntBASIC5.11□□□□□ -1.59
CDH13P55290 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH13P55290 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH13P55290 GAPDHP58-201ENST00000438477 1006 ntBASIC5.11□□□□□ -1.59
CDH13P55290 AL138899.2-201ENST00000439139 499 ntBASIC5.11□□□□□ -1.59
CDH13P55290 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH13P55290 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH13P55290 YWHAEP1-201ENST00000453697 763 ntBASIC5.11□□□□□ -1.59
CDH13P55290 MTND2P6-201ENST00000455337 1030 ntBASIC5.11□□□□□ -1.59
CDH13P55290 AC079168.1-201ENST00000458741 345 ntBASIC5.11□□□□□ -1.59
CDH13P55290 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH13P55290 AC010468.3-201ENST00000508225 458 ntBASIC5.11□□□□□ -1.59
CDH13P55290 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH13P55290 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH13P55290 SNORA76.2-201ENST00000517095 137 ntBASIC5.11□□□□□ -1.59
CDH13P55290 RNA5SP373-201ENST00000517271 95 ntBASIC5.11□□□□□ -1.59
CDH13P55290 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.11□□□□□ -1.59
CDH13P55290 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.11□□□□□ -1.59
CDH13P55290 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH13P55290 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH13P55290 AL512310.9-201ENST00000553311 948 ntBASIC5.11□□□□□ -1.59
CDH13P55290 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH13P55290 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH13P55290 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH13P55290 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH13P55290 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH13P55290 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH13P55290 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH13P55290 AC092574.1-201ENST00000609771 420 ntBASIC5.11□□□□□ -1.59
CDH13P55290 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.11□□□□□ -1.59
CDH13P55290 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH13P55290 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.11□□□□□ -1.59
CDH13P55290 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH13P55290 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH13P55290 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH13P55290 RBPJP2-201ENST00000618187 1444 ntBASIC5.11□□□□□ -1.59
CDH13P55290 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CDH13P55290 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH13P55290 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH13P55290 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH13P55290 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH13P55290 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
CDH13P55290 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH13P55290 AC104623.2-202ENST00000623477 4002 ntBASIC5.11□□□□□ -1.59
CDH13P55290 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
CDH13P55290 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms