Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC012339.2-201ENST00000523996 453 ntBASIC5.15□□□□□ -1.59
CDH4P55283 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.15□□□□□ -1.59
CDH4P55283 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH4P55283 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.15□□□□□ -1.59
CDH4P55283 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.15□□□□□ -1.59
CDH4P55283 EIF1P5-201ENST00000585002 234 ntBASIC5.15□□□□□ -1.59
CDH4P55283 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH4P55283 AL159169.2-201ENST00000610061 1269 ntBASIC5.15□□□□□ -1.59
CDH4P55283 AL353662.3-201ENST00000625131 237 ntBASIC5.15□□□□□ -1.59
CDH4P55283 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH4P55283 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDH4P55283 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH4P55283 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CDH4P55283 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.15□□□□□ -1.59
CDH4P55283 AC123912.3-201ENST00000600907 1367 ntBASIC5.15□□□□□ -1.59
CDH4P55283 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH4P55283 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH4P55283 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDH4P55283 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH4P55283 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH4P55283 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
CDH4P55283 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CDH4P55283 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH4P55283 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH4P55283 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDH4P55283 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CDH4P55283 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CDH4P55283 RNU6-1331P-201ENST00000363658 106 ntBASIC5.14□□□□□ -1.59
CDH4P55283 AL021331.1-201ENST00000402817 582 ntBASIC5.14□□□□□ -1.59
CDH4P55283 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH4P55283 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH4P55283 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH4P55283 RPL12P43-201ENST00000420608 499 ntBASIC5.14□□□□□ -1.59
CDH4P55283 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH4P55283 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH4P55283 RPS27P18-201ENST00000431701 247 ntBASIC5.14□□□□□ -1.59
CDH4P55283 RPL12P3-201ENST00000440080 396 ntBASIC5.14□□□□□ -1.59
CDH4P55283 AL450023.3-201ENST00000440592 271 ntBASIC5.14□□□□□ -1.59
CDH4P55283 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.14□□□□□ -1.59
CDH4P55283 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH4P55283 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH4P55283 HMGB1P4-201ENST00000455362 567 ntBASIC5.14□□□□□ -1.59
CDH4P55283 snoU13.20-201ENST00000459180 104 ntBASIC5.14□□□□□ -1.59
CDH4P55283 NIFKP7-201ENST00000503365 834 ntBASIC5.14□□□□□ -1.59
CDH4P55283 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH4P55283 AC125612.1-201ENST00000547580 377 ntBASIC5.14□□□□□ -1.59
CDH4P55283 AC006349.1-201ENST00000555526 235 ntBASIC5.14□□□□□ -1.59
CDH4P55283 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH4P55283 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH4P55283 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH4P55283 MIR4443-201ENST00000585052 53 ntBASIC5.14□□□□□ -1.59
CDH4P55283 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH4P55283 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH4P55283 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH4P55283 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH4P55283 AC005377.1-201ENST00000605126 456 ntBASIC5.14□□□□□ -1.59
CDH4P55283 SNORA35B-201ENST00000607417 129 ntBASIC5.14□□□□□ -1.59
CDH4P55283 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.14□□□□□ -1.59
CDH4P55283 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH4P55283 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH4P55283 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDH4P55283 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CDH4P55283 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH4P55283 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH4P55283 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CDH4P55283 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH4P55283 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CDH4P55283 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDH4P55283 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CDH4P55283 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
CDH4P55283 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH4P55283 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH4P55283 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH4P55283 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH4P55283 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CDH4P55283 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.13□□□□□ -1.59
CDH4P55283 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH4P55283 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH4P55283 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.13□□□□□ -1.59
CDH4P55283 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CDH4P55283 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH4P55283 SNORA70.10-201ENST00000384515 134 ntBASIC5.13□□□□□ -1.59
CDH4P55283 CHEK2P3-201ENST00000416118 248 ntBASIC5.13□□□□□ -1.59
CDH4P55283 AF186996.5-201ENST00000418098 904 ntBASIC5.13□□□□□ -1.59
CDH4P55283 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.13□□□□□ -1.59
CDH4P55283 NPM1P22-201ENST00000427761 952 ntBASIC5.13□□□□□ -1.59
CDH4P55283 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.13□□□□□ -1.59
CDH4P55283 RAB9AP5-201ENST00000437794 597 ntBASIC5.13□□□□□ -1.59
CDH4P55283 PRPF38AP2-201ENST00000438179 851 ntBASIC5.13□□□□□ -1.59
CDH4P55283 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH4P55283 RAB9AP2-201ENST00000443911 597 ntBASIC5.13□□□□□ -1.59
CDH4P55283 RPL7P61-201ENST00000451721 751 ntBASIC5.13□□□□□ -1.59
CDH4P55283 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH4P55283 AP001960.1-201ENST00000506494 658 ntBASIC5.13□□□□□ -1.59
CDH4P55283 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH4P55283 AP001804.2-201ENST00000533932 910 ntBASIC5.13□□□□□ -1.59
CDH4P55283 AC008033.2-201ENST00000542626 177 ntBASIC5.13□□□□□ -1.59
CDH4P55283 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH4P55283 TVP23CP2-201ENST00000571473 623 ntBASIC5.13□□□□□ -1.59
CDH4P55283 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms