Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CASP4P49662 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CASP4P49662 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CASP4P49662 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CASP4P49662 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.35□□□□□ -1.55
CASP4P49662 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CASP4P49662 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CASP4P49662 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CASP4P49662 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.35□□□□□ -1.55
CASP4P49662 MIPEPP2-201ENST00000422560 1819 ntBASIC5.35□□□□□ -1.55
CASP4P49662 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.35□□□□□ -1.55
CASP4P49662 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.35□□□□□ -1.55
CASP4P49662 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CASP4P49662 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CASP4P49662 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CASP4P49662 AC017079.1-201ENST00000333650 415 ntBASIC5.35□□□□□ -1.55
CASP4P49662 RNU6-249P-201ENST00000363016 102 ntBASIC5.35□□□□□ -1.55
CASP4P49662 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CASP4P49662 AL645927.1-201ENST00000396783 406 ntBASIC5.35□□□□□ -1.55
CASP4P49662 EI24P3-201ENST00000399046 1062 ntBASIC5.35□□□□□ -1.55
CASP4P49662 GTF2IP5-201ENST00000414608 731 ntBASIC5.35□□□□□ -1.55
CASP4P49662 CHEK2P3-201ENST00000416118 248 ntBASIC5.35□□□□□ -1.55
CASP4P49662 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.35□□□□□ -1.55
CASP4P49662 AC093414.1-201ENST00000434712 514 ntBASIC5.35□□□□□ -1.55
CASP4P49662 AC104849.1-201ENST00000462623 405 ntBASIC5.35□□□□□ -1.55
CASP4P49662 AP002371.1-201ENST00000463604 433 ntBASIC5.35□□□□□ -1.55
CASP4P49662 USP9YP2-201ENST00000504503 1000 ntBASIC5.35□□□□□ -1.55
CASP4P49662 USP9YP1-201ENST00000513521 1002 ntBASIC5.35□□□□□ -1.55
CASP4P49662 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CASP4P49662 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.35□□□□□ -1.55
CASP4P49662 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.35□□□□□ -1.55
CASP4P49662 OR5AZ1P-201ENST00000527448 943 ntBASIC5.35□□□□□ -1.55
CASP4P49662 GCSHP4-201ENST00000538792 439 ntBASIC5.35□□□□□ -1.55
CASP4P49662 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CASP4P49662 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.35□□□□□ -1.55
CASP4P49662 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.35□□□□□ -1.55
CASP4P49662 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.35□□□□□ -1.55
CASP4P49662 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.35□□□□□ -1.55
CASP4P49662 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.35□□□□□ -1.55
CASP4P49662 AC133644.2-201ENST00000608142 540 ntBASIC5.35□□□□□ -1.55
CASP4P49662 MIR7155-201ENST00000615925 56 ntBASIC5.35□□□□□ -1.55
CASP4P49662 AC019206.1-201ENST00000621938 425 ntBASIC5.35□□□□□ -1.55
CASP4P49662 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.35□□□□□ -1.55
CASP4P49662 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CASP4P49662 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.35□□□□□ -1.55
CASP4P49662 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.35□□□□□ -1.55
CASP4P49662 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CASP4P49662 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.35□□□□□ -1.55
CASP4P49662 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.35□□□□□ -1.55
CASP4P49662 AC008758.3-201ENST00000507003 1829 ntBASIC5.34□□□□□ -1.55
CASP4P49662 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CASP4P49662 AL022393.1-201ENST00000625142 1677 ntBASIC5.34□□□□□ -1.55
CASP4P49662 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CASP4P49662 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CASP4P49662 NAMPTP1-201ENST00000440465 2514 ntBASIC5.34□□□□□ -1.55
CASP4P49662 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CASP4P49662 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CASP4P49662 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CASP4P49662 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.34□□□□□ -1.55
CASP4P49662 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CASP4P49662 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CASP4P49662 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
CASP4P49662 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CASP4P49662 MIR105-2-201ENST00000385083 81 ntBASIC5.34□□□□□ -1.55
CASP4P49662 CHMP1B2P-201ENST00000399581 597 ntBASIC5.34□□□□□ -1.55
CASP4P49662 RPL10P10-201ENST00000403509 664 ntBASIC5.34□□□□□ -1.55
CASP4P49662 RNA5SP345-201ENST00000410646 108 ntBASIC5.34□□□□□ -1.55
CASP4P49662 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.34□□□□□ -1.55
CASP4P49662 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.34□□□□□ -1.55
CASP4P49662 CEACAMP7-201ENST00000444105 496 ntBASIC5.34□□□□□ -1.55
CASP4P49662 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.34□□□□□ -1.55
CASP4P49662 RN7SL517P-201ENST00000462240 305 ntBASIC5.34□□□□□ -1.55
CASP4P49662 AC090686.1-201ENST00000481577 749 ntBASIC5.34□□□□□ -1.55
CASP4P49662 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.34□□□□□ -1.55
CASP4P49662 NDUFA5P12-201ENST00000503796 343 ntBASIC5.34□□□□□ -1.55
CASP4P49662 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CASP4P49662 BTF3P13-201ENST00000513224 490 ntBASIC5.34□□□□□ -1.55
CASP4P49662 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.34□□□□□ -1.55
CASP4P49662 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.34□□□□□ -1.55
CASP4P49662 AL049839.1-201ENST00000556151 657 ntBASIC5.34□□□□□ -1.55
CASP4P49662 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.34□□□□□ -1.55
CASP4P49662 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.34□□□□□ -1.55
CASP4P49662 AC010547.7-201ENST00000570323 333 ntBASIC5.34□□□□□ -1.55
CASP4P49662 TVP23CP2-201ENST00000571473 623 ntBASIC5.34□□□□□ -1.55
CASP4P49662 CYCSP40-201ENST00000575927 294 ntBASIC5.34□□□□□ -1.55
CASP4P49662 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.34□□□□□ -1.55
CASP4P49662 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.34□□□□□ -1.55
CASP4P49662 AC015914.2-201ENST00000618167 288 ntBASIC5.34□□□□□ -1.55
CASP4P49662 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.34□□□□□ -1.55
CASP4P49662 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CASP4P49662 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.34□□□□□ -1.55
CASP4P49662 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
CASP4P49662 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CASP4P49662 AC133552.1-201ENST00000569988 4007 ntBASIC5.34□□□□□ -1.55
CASP4P49662 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.34□□□□□ -1.56
CASP4P49662 AC093909.5-201ENST00000621839 1799 ntBASIC5.34□□□□□ -1.56
CASP4P49662 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
CASP4P49662 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CASP4P49662 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.34□□□□□ -1.56
CASP4P49662 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms