Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.13□□□□□ -1.59
HTTP42858 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HTTP42858 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.13□□□□□ -1.59
HTTP42858 AC146944.2-203ENST00000502493 354 ntBASIC5.13□□□□□ -1.59
HTTP42858 AC139495.1-202ENST00000513164 354 ntBASIC5.13□□□□□ -1.59
HTTP42858 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.13□□□□□ -1.59
HTTP42858 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HTTP42858 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.13□□□□□ -1.59
HTTP42858 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HTTP42858 FZD10-AS1-201ENST00000505807 10193 ntTSL 2 BASIC5.13□□□□□ -1.59
HTTP42858 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
HTTP42858 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HTTP42858 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.13□□□□□ -1.59
HTTP42858 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
HTTP42858 RN7SKP185-201ENST00000362813 326 ntBASIC5.12□□□□□ -1.59
HTTP42858 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.12□□□□□ -1.59
HTTP42858 AC025164.1-201ENST00000496249 478 ntBASIC5.12□□□□□ -1.59
HTTP42858 AC090515.3-201ENST00000560431 315 ntBASIC5.12□□□□□ -1.59
HTTP42858 OR8B9P-202ENST00000642028 5216 ntBASIC5.12□□□□□ -1.59
HTTP42858 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HTTP42858 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HTTP42858 AC107068.1-201ENST00000563286 4218 ntBASIC5.12□□□□□ -1.59
HTTP42858 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
HTTP42858 LTBP1-204ENST00000407925 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HTTP42858 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC5.12□□□□□ -1.59
HTTP42858 RNA5SP130-201ENST00000364431 114 ntBASIC5.12□□□□□ -1.59
HTTP42858 MTCO1P54-201ENST00000430139 712 ntBASIC5.12□□□□□ -1.59
HTTP42858 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.12□□□□□ -1.59
HTTP42858 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.12□□□□□ -1.59
HTTP42858 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.12□□□□□ -1.59
HTTP42858 SNORA74C-1-201ENST00000580726 201 ntBASIC5.12□□□□□ -1.59
HTTP42858 AP005019.3-201ENST00000620418 560 ntBASIC5.12□□□□□ -1.59
HTTP42858 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HTTP42858 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HTTP42858 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.12□□□□□ -1.59
HTTP42858 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC5.12□□□□□ -1.59
HTTP42858 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC5.12□□□□□ -1.59
HTTP42858 MEGF10-203ENST00000503335 7571 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HTTP42858 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.12□□□□□ -1.59
HTTP42858 RNU6ATAC-201ENST00000408749 126 ntBASIC5.12□□□□□ -1.59
HTTP42858 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HTTP42858 CDY14P-201ENST00000431260 1014 ntBASIC5.12□□□□□ -1.59
HTTP42858 CDY12P-201ENST00000440679 1015 ntBASIC5.12□□□□□ -1.59
HTTP42858 CDY13P-201ENST00000445813 1015 ntBASIC5.12□□□□□ -1.59
HTTP42858 RPL23AP43-201ENST00000446445 471 ntBASIC5.12□□□□□ -1.59
HTTP42858 CDY23P-201ENST00000451661 1014 ntBASIC5.12□□□□□ -1.59
HTTP42858 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HTTP42858 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.12□□□□□ -1.59
HTTP42858 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.12□□□□□ -1.59
HTTP42858 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.12□□□□□ -1.59
HTTP42858 AC096577.2-201ENST00000611455 153 ntBASIC5.12□□□□□ -1.59
HTTP42858 MIR6133-201ENST00000617057 108 ntBASIC5.12□□□□□ -1.59
HTTP42858 MIR3653-201ENST00000625572 110 ntBASIC5.12□□□□□ -1.59
HTTP42858 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.12□□□□□ -1.59
HTTP42858 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HTTP42858 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.11□□□□□ -1.59
HTTP42858 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HTTP42858 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HTTP42858 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC5.11□□□□□ -1.59
HTTP42858 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HTTP42858 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HTTP42858 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HTTP42858 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.11□□□□□ -1.59
HTTP42858 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HTTP42858 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HTTP42858 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.11□□□□□ -1.59
HTTP42858 RPL7P15-201ENST00000461190 712 ntBASIC5.11□□□□□ -1.59
HTTP42858 ENPP7P11-201ENST00000505915 627 ntBASIC5.11□□□□□ -1.59
HTTP42858 AP001804.1-201ENST00000526868 919 ntBASIC5.11□□□□□ -1.59
HTTP42858 AL354984.3-201ENST00000604803 325 ntBASIC5.11□□□□□ -1.59
HTTP42858 AC012468.1-201ENST00000604888 430 ntBASIC5.11□□□□□ -1.59
HTTP42858 OR2BH1P-201ENST00000608850 864 ntBASIC5.11□□□□□ -1.59
HTTP42858 AC006453.5-201ENST00000636451 619 ntBASIC5.11□□□□□ -1.59
HTTP42858 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
HTTP42858 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HTTP42858 THSD7B-201ENST00000272643 5939 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HTTP42858 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
HTTP42858 FAM91A3P-201ENST00000456826 2544 ntBASIC5.11□□□□□ -1.59
HTTP42858 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HTTP42858 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.11□□□□□ -1.59
HTTP42858 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HTTP42858 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC5.11□□□□□ -1.59
HTTP42858 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HTTP42858 RLIMP1-201ENST00000339626 1680 ntBASIC5.11□□□□□ -1.59
HTTP42858 NBPF9-202ENST00000584027 5034 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
HTTP42858 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.11□□□□□ -1.59
HTTP42858 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HTTP42858 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HTTP42858 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.11□□□□□ -1.59
HTTP42858 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.11□□□□□ -1.59
HTTP42858 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HTTP42858 RNU4-89P-201ENST00000607443 133 ntBASIC5.11□□□□□ -1.59
HTTP42858 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HTTP42858 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HTTP42858 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.11□□□□□ -1.59
HTTP42858 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.11□□□□□ -1.59
HTTP42858 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HTTP42858 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
HTTP42858 AC007618.1-201ENST00000366455 732 ntBASIC5.1□□□□□ -1.59
HTTP42858 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms