Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC092593.2-201ENST00000513866 913 ntBASIC5.27□□□□□ -1.57
TNFSF9P41273 AL671862.1-201ENST00000515851 349 ntBASIC5.27□□□□□ -1.57
TNFSF9P41273 RNA5SP230-201ENST00000517039 122 ntBASIC5.27□□□□□ -1.57
TNFSF9P41273 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.27□□□□□ -1.57
TNFSF9P41273 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.27□□□□□ -1.57
TNFSF9P41273 CR383656.6-201ENST00000550518 394 ntBASIC5.27□□□□□ -1.57
TNFSF9P41273 UBE2FP2-201ENST00000566646 462 ntBASIC5.27□□□□□ -1.57
TNFSF9P41273 AC023389.2-201ENST00000580031 955 ntBASIC5.27□□□□□ -1.57
TNFSF9P41273 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.27□□□□□ -1.57
TNFSF9P41273 Z95327.3-201ENST00000610385 572 ntBASIC5.27□□□□□ -1.57
TNFSF9P41273 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.27□□□□□ -1.57
TNFSF9P41273 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.27□□□□□ -1.57
TNFSF9P41273 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TNFSF9P41273 CDY11P-201ENST00000447168 1651 ntBASIC5.27□□□□□ -1.57
TNFSF9P41273 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.27□□□□□ -1.57
TNFSF9P41273 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TNFSF9P41273 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
TNFSF9P41273 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
TNFSF9P41273 AL022311.1-201ENST00000623726 19416 ntBASIC5.27□□□□□ -1.57
TNFSF9P41273 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
TNFSF9P41273 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF9P41273 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.26□□□□□ -1.57
TNFSF9P41273 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TNFSF9P41273 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF9P41273 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.26□□□□□ -1.57
TNFSF9P41273 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TNFSF9P41273 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TNFSF9P41273 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF9P41273 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF9P41273 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.26□□□□□ -1.57
TNFSF9P41273 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF9P41273 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.26□□□□□ -1.57
TNFSF9P41273 RSU1P3-201ENST00000412878 835 ntBASIC5.26□□□□□ -1.57
TNFSF9P41273 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.26□□□□□ -1.57
TNFSF9P41273 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.26□□□□□ -1.57
TNFSF9P41273 RPL35AP21-201ENST00000437667 333 ntBASIC5.26□□□□□ -1.57
TNFSF9P41273 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF9P41273 PPP1R11P1-201ENST00000486095 376 ntBASIC5.26□□□□□ -1.57
TNFSF9P41273 AC007686.1-201ENST00000488511 463 ntBASIC5.26□□□□□ -1.57
TNFSF9P41273 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.26□□□□□ -1.57
TNFSF9P41273 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.26□□□□□ -1.57
TNFSF9P41273 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.26□□□□□ -1.57
TNFSF9P41273 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.26□□□□□ -1.57
TNFSF9P41273 AC108043.1-201ENST00000512696 574 ntBASIC5.26□□□□□ -1.57
TNFSF9P41273 RPL23AP53-201ENST00000521854 457 ntBASIC5.26□□□□□ -1.57
TNFSF9P41273 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.26□□□□□ -1.57
TNFSF9P41273 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.26□□□□□ -1.57
TNFSF9P41273 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.26□□□□□ -1.57
TNFSF9P41273 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.26□□□□□ -1.57
TNFSF9P41273 AP000919.1-201ENST00000582850 985 ntBASIC5.26□□□□□ -1.57
TNFSF9P41273 AC022726.1-201ENST00000587475 207 ntBASIC5.26□□□□□ -1.57
TNFSF9P41273 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF9P41273 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.26□□□□□ -1.57
TNFSF9P41273 CR381572.2-201ENST00000624852 397 ntBASIC5.26□□□□□ -1.57
TNFSF9P41273 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.26□□□□□ -1.57
TNFSF9P41273 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.26□□□□□ -1.57
TNFSF9P41273 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
TNFSF9P41273 AC100778.3-201ENST00000580060 1750 ntBASIC5.26□□□□□ -1.57
TNFSF9P41273 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF9P41273 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF9P41273 AC011755.1-201ENST00000623763 2049 ntBASIC5.26□□□□□ -1.57
TNFSF9P41273 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF9P41273 NCLP2-201ENST00000416078 1462 ntBASIC5.26□□□□□ -1.57
TNFSF9P41273 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF9P41273 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TNFSF9P41273 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
TNFSF9P41273 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF9P41273 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF9P41273 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF9P41273 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF9P41273 RN7SKP100-201ENST00000411258 284 ntBASIC5.25□□□□□ -1.57
TNFSF9P41273 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.25□□□□□ -1.57
TNFSF9P41273 AC104333.2-201ENST00000422630 192 ntBASIC5.25□□□□□ -1.57
TNFSF9P41273 NIPA2P1-201ENST00000426223 976 ntBASIC5.25□□□□□ -1.57
TNFSF9P41273 VTI1BP4-201ENST00000427516 527 ntBASIC5.25□□□□□ -1.57
TNFSF9P41273 RN7SL517P-201ENST00000462240 305 ntBASIC5.25□□□□□ -1.57
TNFSF9P41273 RN7SL558P-201ENST00000497468 299 ntBASIC5.25□□□□□ -1.57
TNFSF9P41273 GOLGA5P1-201ENST00000507317 980 ntBASIC5.25□□□□□ -1.57
TNFSF9P41273 AC093249.4-201ENST00000564755 259 ntBASIC5.25□□□□□ -1.57
TNFSF9P41273 AC090286.3-201ENST00000573133 187 ntBASIC5.25□□□□□ -1.57
TNFSF9P41273 MIR4660-201ENST00000583549 74 ntBASIC5.25□□□□□ -1.57
TNFSF9P41273 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.25□□□□□ -1.57
TNFSF9P41273 FAM27B-201ENST00000610601 213 ntBASIC5.25□□□□□ -1.57
TNFSF9P41273 AP000550.3-201ENST00000637734 379 ntBASIC5.25□□□□□ -1.57
TNFSF9P41273 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.25□□□□□ -1.57
TNFSF9P41273 AC012078.1-201ENST00000405035 1646 ntBASIC5.25□□□□□ -1.57
TNFSF9P41273 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF9P41273 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF9P41273 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF9P41273 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.25□□□□□ -1.57
TNFSF9P41273 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF9P41273 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.24□□□□□ -1.57
TNFSF9P41273 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF9P41273 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
TNFSF9P41273 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF9P41273 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF9P41273 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TNFSF9P41273 AC092162.1-201ENST00000432828 434 ntBASIC5.24□□□□□ -1.57
TNFSF9P41273 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.24□□□□□ -1.57
TNFSF9P41273 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms