Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.25□□□□□ -1.41
RFC4P35249 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RFC4P35249 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
RFC4P35249 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
RFC4P35249 MIR1193-201ENST00000408109 78 ntBASIC6.25□□□□□ -1.41
RFC4P35249 ELOCP19-201ENST00000411919 318 ntBASIC6.25□□□□□ -1.41
RFC4P35249 AC114755.2-201ENST00000413520 361 ntBASIC6.25□□□□□ -1.41
RFC4P35249 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.25□□□□□ -1.41
RFC4P35249 AC016831.4-201ENST00000438302 307 ntBASIC6.25□□□□□ -1.41
RFC4P35249 NUTF2P7-201ENST00000453086 375 ntBASIC6.25□□□□□ -1.41
RFC4P35249 RPS5P7-201ENST00000456664 608 ntBASIC6.25□□□□□ -1.41
RFC4P35249 MTND2P28-201ENST00000457540 1044 ntBASIC6.25□□□□□ -1.41
RFC4P35249 AC091180.1-201ENST00000462104 372 ntBASIC6.25□□□□□ -1.41
RFC4P35249 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.25□□□□□ -1.41
RFC4P35249 AC135999.1-201ENST00000478962 479 ntBASIC6.25□□□□□ -1.41
RFC4P35249 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.25□□□□□ -1.41
RFC4P35249 RN7SKP21-201ENST00000516503 220 ntBASIC6.25□□□□□ -1.41
RFC4P35249 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.25□□□□□ -1.41
RFC4P35249 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6.25□□□□□ -1.41
RFC4P35249 AC068724.3-201ENST00000625906 87 ntBASIC6.25□□□□□ -1.41
RFC4P35249 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
RFC4P35249 AC000095.2-202ENST00000637415 154 ntBASIC6.25□□□□□ -1.41
RFC4P35249 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.25□□□□□ -1.41
RFC4P35249 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
RFC4P35249 ECM1P2-201ENST00000503354 1577 ntBASIC6.25□□□□□ -1.41
RFC4P35249 AC091046.3-201ENST00000631455 1574 ntBASIC6.25□□□□□ -1.41
RFC4P35249 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RFC4P35249 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RFC4P35249 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.25□□□□□ -1.41
RFC4P35249 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RFC4P35249 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.24□□□□□ -1.41
RFC4P35249 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.24□□□□□ -1.41
RFC4P35249 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
RFC4P35249 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RFC4P35249 LYST-202ENST00000389794 12985 ntTSL 5 BASIC6.24□□□□□ -1.41
RFC4P35249 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.24□□□□□ -1.41
RFC4P35249 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.24□□□□□ -1.41
RFC4P35249 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RFC4P35249 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RFC4P35249 SNORD113.2-201ENST00000364166 89 ntBASIC6.24□□□□□ -1.41
RFC4P35249 MIR129-1-201ENST00000384972 72 ntBASIC6.24□□□□□ -1.41
RFC4P35249 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.24□□□□□ -1.41
RFC4P35249 RANP7-201ENST00000418085 644 ntBASIC6.24□□□□□ -1.41
RFC4P35249 AL592293.2-201ENST00000422292 996 ntBASIC6.24□□□□□ -1.41
RFC4P35249 MRPS21P2-201ENST00000424704 264 ntBASIC6.24□□□□□ -1.41
RFC4P35249 AL732292.1-201ENST00000426692 226 ntBASIC6.24□□□□□ -1.41
RFC4P35249 RPL12P28-201ENST00000430852 489 ntBASIC6.24□□□□□ -1.41
RFC4P35249 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC6.24□□□□□ -1.41
RFC4P35249 AC091153.1-201ENST00000466297 402 ntBASIC6.24□□□□□ -1.41
RFC4P35249 RN7SL41P-201ENST00000476144 297 ntBASIC6.24□□□□□ -1.41
RFC4P35249 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.24□□□□□ -1.41
RFC4P35249 RNA5SP392-201ENST00000516905 112 ntBASIC6.24□□□□□ -1.41
RFC4P35249 AC134698.5-201ENST00000519444 336 ntBASIC6.24□□□□□ -1.41
RFC4P35249 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RFC4P35249 BNIP3P5-201ENST00000562290 498 ntBASIC6.24□□□□□ -1.41
RFC4P35249 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.24□□□□□ -1.41
RFC4P35249 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.24□□□□□ -1.41
RFC4P35249 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RFC4P35249 FAM27B-201ENST00000610601 213 ntBASIC6.24□□□□□ -1.41
RFC4P35249 AC005962.2-201ENST00000611427 652 ntBASIC6.24□□□□□ -1.41
RFC4P35249 AC087821.1-201ENST00000623639 567 ntBASIC6.24□□□□□ -1.41
RFC4P35249 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.24□□□□□ -1.41
RFC4P35249 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
RFC4P35249 CASC19-260ENST00000641828 2001 ntBASIC6.24□□□□□ -1.41
RFC4P35249 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.24□□□□□ -1.41
RFC4P35249 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.24□□□□□ -1.41
RFC4P35249 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RFC4P35249 AC108751.5-201ENST00000492880 1336 ntBASIC6.24□□□□□ -1.41
RFC4P35249 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
RFC4P35249 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RFC4P35249 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.23□□□□□ -1.41
RFC4P35249 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RFC4P35249 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RFC4P35249 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RFC4P35249 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.23□□□□□ -1.41
RFC4P35249 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
RFC4P35249 RNA5SP447-201ENST00000363749 119 ntBASIC6.23□□□□□ -1.41
RFC4P35249 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
RFC4P35249 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
RFC4P35249 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.23□□□□□ -1.41
RFC4P35249 AC021876.1-201ENST00000425959 359 ntBASIC6.23□□□□□ -1.41
RFC4P35249 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RFC4P35249 AC016772.1-201ENST00000444170 1261 ntBASIC6.23□□□□□ -1.41
RFC4P35249 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RFC4P35249 AC004980.3-201ENST00000447046 365 ntBASIC6.23□□□□□ -1.41
RFC4P35249 HMGB1P4-201ENST00000455362 567 ntBASIC6.23□□□□□ -1.41
RFC4P35249 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6.23□□□□□ -1.41
RFC4P35249 AC012123.2-201ENST00000485809 248 ntBASIC6.23□□□□□ -1.41
RFC4P35249 OR11I1P-201ENST00000486033 954 ntBASIC6.23□□□□□ -1.41
RFC4P35249 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.23□□□□□ -1.41
RFC4P35249 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.23□□□□□ -1.41
RFC4P35249 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.23□□□□□ -1.41
RFC4P35249 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC6.23□□□□□ -1.41
RFC4P35249 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.23□□□□□ -1.41
RFC4P35249 AC016839.1-201ENST00000578162 867 ntBASIC6.23□□□□□ -1.41
RFC4P35249 MIR7853-201ENST00000584820 132 ntBASIC6.23□□□□□ -1.41
RFC4P35249 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.23□□□□□ -1.41
RFC4P35249 RPL12P25-202ENST00000598100 674 ntBASIC6.23□□□□□ -1.41
RFC4P35249 AC125494.2-201ENST00000602431 657 ntBASIC6.23□□□□□ -1.41
RFC4P35249 AC103792.1-201ENST00000603591 919 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms