Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC072039.2-201ENST00000608883 439 ntBASIC7.33□□□□□ -1.24
ERCC3P19447 FAM27E2-201ENST00000619668 403 ntBASIC7.33□□□□□ -1.24
ERCC3P19447 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC7.33□□□□□ -1.24
ERCC3P19447 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.33□□□□□ -1.24
ERCC3P19447 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.33□□□□□ -1.24
ERCC3P19447 AC125238.2-201ENST00000430003 1440 ntBASIC7.33□□□□□ -1.24
ERCC3P19447 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.33□□□□□ -1.24
ERCC3P19447 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.33□□□□□ -1.24
ERCC3P19447 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
ERCC3P19447 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
ERCC3P19447 AL136984.1-201ENST00000607611 1893 ntBASIC7.32□□□□□ -1.24
ERCC3P19447 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERCC3P19447 AC007842.1-201ENST00000597336 2039 ntBASIC7.32□□□□□ -1.24
ERCC3P19447 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERCC3P19447 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC7.32□□□□□ -1.24
ERCC3P19447 AL391261.1-201ENST00000555712 1479 ntBASIC7.32□□□□□ -1.24
ERCC3P19447 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERCC3P19447 AL662795.2-201ENST00000624252 3706 ntBASIC7.32□□□□□ -1.24
ERCC3P19447 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.32□□□□□ -1.24
ERCC3P19447 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.32□□□□□ -1.24
ERCC3P19447 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
ERCC3P19447 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
ERCC3P19447 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.32□□□□□ -1.24
ERCC3P19447 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERCC3P19447 OR2M1P-201ENST00000318104 951 ntBASIC7.32□□□□□ -1.24
ERCC3P19447 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERCC3P19447 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERCC3P19447 RNU6-1200P-201ENST00000384162 107 ntBASIC7.32□□□□□ -1.24
ERCC3P19447 HMGN1P20-201ENST00000411849 300 ntBASIC7.32□□□□□ -1.24
ERCC3P19447 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC7.32□□□□□ -1.24
ERCC3P19447 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC7.32□□□□□ -1.24
ERCC3P19447 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.32□□□□□ -1.24
ERCC3P19447 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.32□□□□□ -1.24
ERCC3P19447 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC7.32□□□□□ -1.24
ERCC3P19447 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.32□□□□□ -1.24
ERCC3P19447 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.32□□□□□ -1.24
ERCC3P19447 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.32□□□□□ -1.24
ERCC3P19447 YWHAQP9-201ENST00000445891 512 ntBASIC7.32□□□□□ -1.24
ERCC3P19447 AL035551.1-201ENST00000446931 348 ntBASIC7.32□□□□□ -1.24
ERCC3P19447 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC7.32□□□□□ -1.24
ERCC3P19447 AC073387.1-201ENST00000453261 709 ntBASIC7.32□□□□□ -1.24
ERCC3P19447 PNPLA4P1-201ENST00000458328 305 ntBASIC7.32□□□□□ -1.24
ERCC3P19447 AC023194.2-201ENST00000465398 406 ntBASIC7.32□□□□□ -1.24
ERCC3P19447 AC079395.1-201ENST00000510981 262 ntBASIC7.32□□□□□ -1.24
ERCC3P19447 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC7.32□□□□□ -1.24
ERCC3P19447 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC7.32□□□□□ -1.24
ERCC3P19447 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC7.32□□□□□ -1.24
ERCC3P19447 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC7.32□□□□□ -1.24
ERCC3P19447 AC092332.1-201ENST00000563684 829 ntBASIC7.32□□□□□ -1.24
ERCC3P19447 MIR5095-201ENST00000578844 88 ntBASIC7.32□□□□□ -1.24
ERCC3P19447 AL953862.2-201ENST00000603089 820 ntBASIC7.32□□□□□ -1.24
ERCC3P19447 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.32□□□□□ -1.24
ERCC3P19447 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC7.32□□□□□ -1.24
ERCC3P19447 AC018926.3-201ENST00000618841 406 ntBASIC7.32□□□□□ -1.24
ERCC3P19447 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.32□□□□□ -1.24
ERCC3P19447 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC7.32□□□□□ -1.24
ERCC3P19447 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC7.32□□□□□ -1.24
ERCC3P19447 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERCC3P19447 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERCC3P19447 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
ERCC3P19447 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
ERCC3P19447 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
ERCC3P19447 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERCC3P19447 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERCC3P19447 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERCC3P19447 AP000432.2-201ENST00000624164 2048 ntBASIC7.32□□□□□ -1.24
ERCC3P19447 AC025263.3-201ENST00000622965 1396 ntBASIC7.32□□□□□ -1.24
ERCC3P19447 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERCC3P19447 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERCC3P19447 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
ERCC3P19447 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.32□□□□□ -1.24
ERCC3P19447 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERCC3P19447 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.31□□□□□ -1.24
ERCC3P19447 AL359976.1-201ENST00000418655 3528 ntBASIC7.31□□□□□ -1.24
ERCC3P19447 SLC10A5P1-201ENST00000379063 1306 ntBASIC7.31□□□□□ -1.24
ERCC3P19447 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ERCC3P19447 AC109315.1-201ENST00000584143 1347 ntBASIC7.31□□□□□ -1.24
ERCC3P19447 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7.31□□□□□ -1.24
ERCC3P19447 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.31□□□□□ -1.24
ERCC3P19447 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ERCC3P19447 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ERCC3P19447 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ERCC3P19447 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
ERCC3P19447 RNU1-46P-201ENST00000384425 164 ntBASIC7.31□□□□□ -1.24
ERCC3P19447 MIR130B-202ENST00000385018 82 ntBASIC7.31□□□□□ -1.24
ERCC3P19447 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ERCC3P19447 AL450992.3-201ENST00000413192 568 ntBASIC7.31□□□□□ -1.24
ERCC3P19447 OR51A3P-201ENST00000413596 924 ntBASIC7.31□□□□□ -1.24
ERCC3P19447 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.31□□□□□ -1.24
ERCC3P19447 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC7.31□□□□□ -1.24
ERCC3P19447 CEACAMP8-201ENST00000413902 580 ntBASIC7.31□□□□□ -1.24
ERCC3P19447 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC7.31□□□□□ -1.24
ERCC3P19447 HSFY4P-201ENST00000415994 1181 ntBASIC7.31□□□□□ -1.24
ERCC3P19447 RPS3P2-201ENST00000421346 701 ntBASIC7.31□□□□□ -1.24
ERCC3P19447 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC7.31□□□□□ -1.24
ERCC3P19447 IGLV3-4-201ENST00000432300 244 ntBASIC7.31□□□□□ -1.24
ERCC3P19447 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
ERCC3P19447 ISCA1P2-201ENST00000438679 421 ntBASIC7.31□□□□□ -1.24
ERCC3P19447 COX6CP18-201ENST00000448769 222 ntBASIC7.31□□□□□ -1.24
ERCC3P19447 PPIAP7-201ENST00000454070 489 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms