Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TOP1P11387 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TOP1P11387 SMG1P4-204ENST00000523028 4131 ntBASIC5.88□□□□□ -1.47
TOP1P11387 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
TOP1P11387 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TOP1P11387 MTCO1P15-201ENST00000529569 1526 ntBASIC5.88□□□□□ -1.47
TOP1P11387 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TOP1P11387 AC008079.2-201ENST00000623543 20396 ntBASIC5.88□□□□□ -1.47
TOP1P11387 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.88□□□□□ -1.47
TOP1P11387 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
TOP1P11387 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.87□□□□□ -1.47
TOP1P11387 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
TOP1P11387 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TOP1P11387 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.87□□□□□ -1.47
TOP1P11387 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
TOP1P11387 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.87□□□□□ -1.47
TOP1P11387 MIR937-201ENST00000401271 86 ntBASIC5.87□□□□□ -1.47
TOP1P11387 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.87□□□□□ -1.47
TOP1P11387 PTP4A1P1-201ENST00000420539 515 ntBASIC5.87□□□□□ -1.47
TOP1P11387 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.87□□□□□ -1.47
TOP1P11387 PRPF38AP2-201ENST00000438179 851 ntBASIC5.87□□□□□ -1.47
TOP1P11387 RPL31P44-201ENST00000447680 377 ntBASIC5.87□□□□□ -1.47
TOP1P11387 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TOP1P11387 RN7SL319P-201ENST00000480656 221 ntBASIC5.87□□□□□ -1.47
TOP1P11387 AC069304.1-201ENST00000491593 704 ntBASIC5.87□□□□□ -1.47
TOP1P11387 AC023424.1-201ENST00000496058 459 ntBASIC5.87□□□□□ -1.47
TOP1P11387 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.87□□□□□ -1.47
TOP1P11387 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.87□□□□□ -1.47
TOP1P11387 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.87□□□□□ -1.47
TOP1P11387 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
TOP1P11387 NDUFB4P11-201ENST00000560510 395 ntBASIC5.87□□□□□ -1.47
TOP1P11387 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.87□□□□□ -1.47
TOP1P11387 AC004948.1-201ENST00000609858 672 ntBASIC5.87□□□□□ -1.47
TOP1P11387 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.87□□□□□ -1.47
TOP1P11387 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.87□□□□□ -1.47
TOP1P11387 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TOP1P11387 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
TOP1P11387 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.87□□□□□ -1.47
TOP1P11387 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
TOP1P11387 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.87□□□□□ -1.47
TOP1P11387 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TOP1P11387 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TOP1P11387 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TOP1P11387 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TOP1P11387 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
TOP1P11387 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.86□□□□□ -1.47
TOP1P11387 AL731532.2-201ENST00000623542 1953 ntBASIC5.86□□□□□ -1.47
TOP1P11387 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TOP1P11387 AC100778.3-201ENST00000580060 1750 ntBASIC5.86□□□□□ -1.47
TOP1P11387 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TOP1P11387 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TOP1P11387 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
TOP1P11387 AC017079.1-201ENST00000333650 415 ntBASIC5.86□□□□□ -1.47
TOP1P11387 MIR137-201ENST00000385223 102 ntBASIC5.86□□□□□ -1.47
TOP1P11387 U3.32-201ENST00000408116 212 ntBASIC5.86□□□□□ -1.47
TOP1P11387 SNORA79B-201ENST00000410557 148 ntBASIC5.86□□□□□ -1.47
TOP1P11387 COX6B1P1-201ENST00000415962 213 ntBASIC5.86□□□□□ -1.47
TOP1P11387 AF186996.5-201ENST00000418098 904 ntBASIC5.86□□□□□ -1.47
TOP1P11387 RPL7P11-201ENST00000437586 658 ntBASIC5.86□□□□□ -1.47
TOP1P11387 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.86□□□□□ -1.47
TOP1P11387 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.86□□□□□ -1.47
TOP1P11387 HMGB1P4-201ENST00000455362 567 ntBASIC5.86□□□□□ -1.47
TOP1P11387 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.86□□□□□ -1.47
TOP1P11387 RPL35AP28-201ENST00000459730 331 ntBASIC5.86□□□□□ -1.47
TOP1P11387 RPS3AP41-201ENST00000462701 778 ntBASIC5.86□□□□□ -1.47
TOP1P11387 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.86□□□□□ -1.47
TOP1P11387 RPL7P16-201ENST00000479738 738 ntBASIC5.86□□□□□ -1.47
TOP1P11387 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.86□□□□□ -1.47
TOP1P11387 MRPS33P2-201ENST00000507850 322 ntBASIC5.86□□□□□ -1.47
TOP1P11387 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.86□□□□□ -1.47
TOP1P11387 BRD9P1-201ENST00000529855 560 ntBASIC5.86□□□□□ -1.47
TOP1P11387 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.86□□□□□ -1.47
TOP1P11387 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.86□□□□□ -1.47
TOP1P11387 MIR3934-201ENST00000579806 107 ntBASIC5.86□□□□□ -1.47
TOP1P11387 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.86□□□□□ -1.47
TOP1P11387 EIF1P5-201ENST00000585002 234 ntBASIC5.86□□□□□ -1.47
TOP1P11387 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.86□□□□□ -1.47
TOP1P11387 AC005377.1-201ENST00000605126 456 ntBASIC5.86□□□□□ -1.47
TOP1P11387 AC005084.1-201ENST00000605160 304 ntBASIC5.86□□□□□ -1.47
TOP1P11387 AC018695.5-201ENST00000605872 315 ntBASIC5.86□□□□□ -1.47
TOP1P11387 AC087385.3-201ENST00000620477 187 ntBASIC5.86□□□□□ -1.47
TOP1P11387 AC074140.1-201ENST00000621617 208 ntBASIC5.86□□□□□ -1.47
TOP1P11387 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.86□□□□□ -1.47
TOP1P11387 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
TOP1P11387 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.86□□□□□ -1.47
TOP1P11387 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
TOP1P11387 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TOP1P11387 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TOP1P11387 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
TOP1P11387 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.85□□□□□ -1.47
TOP1P11387 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TOP1P11387 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TOP1P11387 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
TOP1P11387 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.85□□□□□ -1.47
TOP1P11387 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.85□□□□□ -1.47
TOP1P11387 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TOP1P11387 AL021331.1-201ENST00000402817 582 ntBASIC5.85□□□□□ -1.47
TOP1P11387 AL136116.2-201ENST00000404020 785 ntBASIC5.85□□□□□ -1.47
TOP1P11387 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.85□□□□□ -1.47
TOP1P11387 AC104333.2-201ENST00000422630 192 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms