Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.97□□□□□ -1.77
CD28P10747 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.97□□□□□ -1.77
CD28P10747 GNG5P5-201ENST00000420444 220 ntBASIC3.97□□□□□ -1.77
CD28P10747 AC017019.1-201ENST00000426129 261 ntBASIC3.97□□□□□ -1.77
CD28P10747 NIPA2P1-201ENST00000426223 976 ntBASIC3.97□□□□□ -1.77
CD28P10747 AL137845.2-201ENST00000444292 988 ntBASIC3.97□□□□□ -1.77
CD28P10747 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC3.97□□□□□ -1.77
CD28P10747 SEPT7P3-201ENST00000455017 621 ntBASIC3.97□□□□□ -1.77
CD28P10747 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.97□□□□□ -1.77
CD28P10747 RN7SL443P-201ENST00000464331 290 ntBASIC3.97□□□□□ -1.77
CD28P10747 AC006463.2-201ENST00000473326 348 ntBASIC3.97□□□□□ -1.77
CD28P10747 RN7SL319P-201ENST00000480656 221 ntBASIC3.97□□□□□ -1.77
CD28P10747 IGLV2-34-201ENST00000490007 283 ntBASIC3.97□□□□□ -1.77
CD28P10747 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC3.97□□□□□ -1.77
CD28P10747 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.97□□□□□ -1.77
CD28P10747 AC010350.1-201ENST00000504908 231 ntBASIC3.97□□□□□ -1.77
CD28P10747 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC3.97□□□□□ -1.77
CD28P10747 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC3.97□□□□□ -1.77
CD28P10747 OR7H2P-201ENST00000513483 306 ntBASIC3.97□□□□□ -1.77
CD28P10747 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3.97□□□□□ -1.77
CD28P10747 SNORA26.10-201ENST00000516427 141 ntBASIC3.97□□□□□ -1.77
CD28P10747 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CD28P10747 NELL2-211ENST00000548826 559 ntTSL 2 BASIC3.97□□□□□ -1.77
CD28P10747 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC3.97□□□□□ -1.77
CD28P10747 NMNAT1P1-201ENST00000554095 876 ntBASIC3.97□□□□□ -1.77
CD28P10747 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.97□□□□□ -1.77
CD28P10747 AL359219.2-201ENST00000555184 348 ntBASIC3.97□□□□□ -1.77
CD28P10747 CLMN-206ENST00000556441 452 ntTSL 5 BASIC3.97□□□□□ -1.77
CD28P10747 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC3.97□□□□□ -1.77
CD28P10747 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC3.97□□□□□ -1.77
CD28P10747 AC009117.1-201ENST00000563948 554 ntBASIC3.97□□□□□ -1.77
CD28P10747 MIR4330-201ENST00000579077 105 ntBASIC3.97□□□□□ -1.77
CD28P10747 MIR7853-201ENST00000584820 132 ntBASIC3.97□□□□□ -1.77
CD28P10747 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC3.97□□□□□ -1.77
CD28P10747 BNIP3P35-201ENST00000604530 490 ntBASIC3.97□□□□□ -1.77
CD28P10747 AC096586.2-201ENST00000610260 441 ntBASIC3.97□□□□□ -1.77
CD28P10747 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.97□□□□□ -1.77
CD28P10747 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CD28P10747 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC3.97□□□□□ -1.77
CD28P10747 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.97□□□□□ -1.77
CD28P10747 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CD28P10747 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC3.97□□□□□ -1.77
CD28P10747 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CD28P10747 AC012618.3-205ENST00000637896 1496 ntBASIC3.97□□□□□ -1.77
CD28P10747 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CD28P10747 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
CD28P10747 USP8-204ENST00000425032 3559 ntTSL 2 BASIC3.97□□□□□ -1.77
CD28P10747 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC3.97□□□□□ -1.77
CD28P10747 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC3.96□□□□□ -1.77
CD28P10747 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC3.96□□□□□ -1.77
CD28P10747 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.96□□□□□ -1.77
CD28P10747 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC3.96□□□□□ -1.77
CD28P10747 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CD28P10747 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
CD28P10747 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
CD28P10747 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CD28P10747 RNA5SP223-201ENST00000365174 120 ntBASIC3.96□□□□□ -1.78
CD28P10747 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CD28P10747 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CD28P10747 Z97832.1-201ENST00000402490 328 ntBASIC3.96□□□□□ -1.78
CD28P10747 USP9YP9-201ENST00000429406 715 ntBASIC3.96□□□□□ -1.78
CD28P10747 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC3.96□□□□□ -1.78
CD28P10747 GYG1P1-201ENST00000460864 698 ntBASIC3.96□□□□□ -1.78
CD28P10747 RN7SL205P-201ENST00000490174 284 ntBASIC3.96□□□□□ -1.78
CD28P10747 AC108043.1-201ENST00000512696 574 ntBASIC3.96□□□□□ -1.78
CD28P10747 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.96□□□□□ -1.78
CD28P10747 RNA5SP43-201ENST00000516559 110 ntBASIC3.96□□□□□ -1.78
CD28P10747 AC138832.1-201ENST00000522871 556 ntBASIC3.96□□□□□ -1.78
CD28P10747 AC137768.1-201ENST00000549998 553 ntBASIC3.96□□□□□ -1.78
CD28P10747 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC3.96□□□□□ -1.78
CD28P10747 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC3.96□□□□□ -1.78
CD28P10747 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.96□□□□□ -1.78
CD28P10747 RN7SL52P-201ENST00000584271 284 ntBASIC3.96□□□□□ -1.78
CD28P10747 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.96□□□□□ -1.78
CD28P10747 AL713998.2-201ENST00000604538 1198 ntBASIC3.96□□□□□ -1.78
CD28P10747 uc_338.18-201ENST00000615451 175 ntBASIC3.96□□□□□ -1.78
CD28P10747 RN7SL722P-201ENST00000617780 284 ntBASIC3.96□□□□□ -1.78
CD28P10747 RN7SL565P-201ENST00000618246 284 ntBASIC3.96□□□□□ -1.78
CD28P10747 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.96□□□□□ -1.78
CD28P10747 AC138965.3-201ENST00000623875 498 ntBASIC3.96□□□□□ -1.78
CD28P10747 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD28P10747 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD28P10747 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD28P10747 CR382285.2-201ENST00000624662 1495 ntBASIC3.96□□□□□ -1.78
CD28P10747 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CD28P10747 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD28P10747 MAPK6PS2-201ENST00000379571 2060 ntBASIC3.96□□□□□ -1.78
CD28P10747 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC3.96□□□□□ -1.78
CD28P10747 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CD28P10747 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD28P10747 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CD28P10747 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC3.95□□□□□ -1.78
CD28P10747 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CD28P10747 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.95□□□□□ -1.78
CD28P10747 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC3.95□□□□□ -1.78
CD28P10747 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CD28P10747 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CD28P10747 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CD28P10747 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC3.95□□□□□ -1.78
CD28P10747 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 204.8 ms