Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL4A1P02462 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL4A1P02462 AC092376.2-201ENST00000622621 4116 ntBASIC5.74□□□□□ -1.49
COL4A1P02462 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL4A1P02462 AC120338.1-201ENST00000625074 1541 ntBASIC5.74□□□□□ -1.49
COL4A1P02462 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.74□□□□□ -1.49
COL4A1P02462 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.74□□□□□ -1.49
COL4A1P02462 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL4A1P02462 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.74□□□□□ -1.49
COL4A1P02462 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL4A1P02462 RNU11-201ENST00000387069 134 ntBASIC5.74□□□□□ -1.49
COL4A1P02462 U3.35-201ENST00000408405 208 ntBASIC5.74□□□□□ -1.49
COL4A1P02462 TMSB10P2-201ENST00000416049 131 ntBASIC5.74□□□□□ -1.49
COL4A1P02462 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.74□□□□□ -1.49
COL4A1P02462 RPL12P28-201ENST00000430852 489 ntBASIC5.74□□□□□ -1.49
COL4A1P02462 Z95152.1-201ENST00000453556 656 ntBASIC5.74□□□□□ -1.49
COL4A1P02462 RPL23AP24-201ENST00000458203 385 ntBASIC5.74□□□□□ -1.49
COL4A1P02462 AC104763.1-201ENST00000475274 360 ntBASIC5.74□□□□□ -1.49
COL4A1P02462 AC073073.1-201ENST00000493920 463 ntBASIC5.74□□□□□ -1.49
COL4A1P02462 AC025164.1-201ENST00000496249 478 ntBASIC5.74□□□□□ -1.49
COL4A1P02462 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL4A1P02462 AC084783.1-201ENST00000565846 910 ntBASIC5.74□□□□□ -1.49
COL4A1P02462 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.74□□□□□ -1.49
COL4A1P02462 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL4A1P02462 AL360012.1-201ENST00000602813 131 ntBASIC5.74□□□□□ -1.49
COL4A1P02462 AC073137.1-201ENST00000605636 634 ntBASIC5.74□□□□□ -1.49
COL4A1P02462 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
COL4A1P02462 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
COL4A1P02462 ZFRP1-201ENST00000457579 2970 ntBASIC5.74□□□□□ -1.49
COL4A1P02462 ICE2P1-201ENST00000512800 1849 ntBASIC5.74□□□□□ -1.49
COL4A1P02462 AC140134.1-201ENST00000511830 3544 ntBASIC5.74□□□□□ -1.49
COL4A1P02462 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL4A1P02462 AC093671.1-201ENST00000624981 2929 ntBASIC5.73□□□□□ -1.49
COL4A1P02462 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL4A1P02462 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
COL4A1P02462 AC008033.1-201ENST00000216407 1162 ntBASIC5.73□□□□□ -1.49
COL4A1P02462 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.73□□□□□ -1.49
COL4A1P02462 AL590762.2-201ENST00000395798 571 ntBASIC5.73□□□□□ -1.49
COL4A1P02462 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
COL4A1P02462 RN7SKP267-201ENST00000410381 285 ntBASIC5.73□□□□□ -1.49
COL4A1P02462 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.73□□□□□ -1.49
COL4A1P02462 AC012519.1-201ENST00000424588 610 ntBASIC5.73□□□□□ -1.49
COL4A1P02462 AP001324.1-201ENST00000428553 399 ntBASIC5.73□□□□□ -1.49
COL4A1P02462 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.73□□□□□ -1.49
COL4A1P02462 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.73□□□□□ -1.49
COL4A1P02462 SCARNA10-201ENST00000459255 330 ntBASIC5.73□□□□□ -1.49
COL4A1P02462 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.73□□□□□ -1.49
COL4A1P02462 PARP1P2-201ENST00000556806 195 ntBASIC5.73□□□□□ -1.49
COL4A1P02462 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL4A1P02462 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.73□□□□□ -1.49
COL4A1P02462 MIR4420-201ENST00000583944 77 ntBASIC5.73□□□□□ -1.49
COL4A1P02462 SS18L2P2-201ENST00000583960 235 ntBASIC5.73□□□□□ -1.49
COL4A1P02462 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.73□□□□□ -1.49
COL4A1P02462 AC090181.2-201ENST00000602975 672 ntBASIC5.73□□□□□ -1.49
COL4A1P02462 SAMM50P1-201ENST00000455403 1399 ntBASIC5.73□□□□□ -1.49
COL4A1P02462 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
COL4A1P02462 AC025574.1-201ENST00000554784 1653 ntBASIC5.73□□□□□ -1.49
COL4A1P02462 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL4A1P02462 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL4A1P02462 AL031119.1-201ENST00000404707 1879 ntBASIC5.73□□□□□ -1.49
COL4A1P02462 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.73□□□□□ -1.49
COL4A1P02462 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.73□□□□□ -1.49
COL4A1P02462 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.73□□□□□ -1.49
COL4A1P02462 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
COL4A1P02462 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL4A1P02462 AC018628.1-201ENST00000624147 3819 ntBASIC5.73□□□□□ -1.49
COL4A1P02462 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.72□□□□□ -1.49
COL4A1P02462 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.72□□□□□ -1.49
COL4A1P02462 RPL23AP93-201ENST00000440847 484 ntBASIC5.72□□□□□ -1.49
COL4A1P02462 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL4A1P02462 MRPL35P2-201ENST00000448009 511 ntBASIC5.72□□□□□ -1.49
COL4A1P02462 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.72□□□□□ -1.49
COL4A1P02462 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.72□□□□□ -1.49
COL4A1P02462 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.72□□□□□ -1.49
COL4A1P02462 RPS27AP16-201ENST00000492222 470 ntBASIC5.72□□□□□ -1.49
COL4A1P02462 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.72□□□□□ -1.49
COL4A1P02462 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.72□□□□□ -1.49
COL4A1P02462 SNORA70.11-201ENST00000515987 138 ntBASIC5.72□□□□□ -1.49
COL4A1P02462 SNORA70.13-201ENST00000516116 138 ntBASIC5.72□□□□□ -1.49
COL4A1P02462 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.72□□□□□ -1.49
COL4A1P02462 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.72□□□□□ -1.49
COL4A1P02462 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.72□□□□□ -1.49
COL4A1P02462 AC006453.5-201ENST00000636451 619 ntBASIC5.72□□□□□ -1.49
COL4A1P02462 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL4A1P02462 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL4A1P02462 AC009951.1-201ENST00000623674 2614 ntBASIC5.72□□□□□ -1.49
COL4A1P02462 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL4A1P02462 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL4A1P02462 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL4A1P02462 AC002525.1-201ENST00000624392 1622 ntBASIC5.72□□□□□ -1.49
COL4A1P02462 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
COL4A1P02462 AL360270.2-201ENST00000562952 5985 ntBASIC5.72□□□□□ -1.49
COL4A1P02462 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC5.72□□□□□ -1.49
COL4A1P02462 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
COL4A1P02462 SAMMSON-210ENST00000641260 1308 ntBASIC5.72□□□□□ -1.49
COL4A1P02462 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL4A1P02462 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL4A1P02462 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
COL4A1P02462 SNORA57.1-201ENST00000391227 145 ntBASIC5.72□□□□□ -1.49
COL4A1P02462 MIR1193-201ENST00000408109 78 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms