Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 COX6CP13-201ENST00000428703 226 ntBASIC4.94□□□□□ -1.62
LSM1O15116 CYCSP6-201ENST00000434498 302 ntBASIC4.94□□□□□ -1.62
LSM1O15116 AL161636.2-201ENST00000445179 927 ntBASIC4.94□□□□□ -1.62
LSM1O15116 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.94□□□□□ -1.62
LSM1O15116 MRPL35P2-201ENST00000448009 511 ntBASIC4.94□□□□□ -1.62
LSM1O15116 BTF3P6-201ENST00000448054 499 ntBASIC4.94□□□□□ -1.62
LSM1O15116 RPS26P41-201ENST00000450370 284 ntBASIC4.94□□□□□ -1.62
LSM1O15116 RPL7AP28-201ENST00000464513 571 ntBASIC4.94□□□□□ -1.62
LSM1O15116 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.94□□□□□ -1.62
LSM1O15116 HMGB3P13-201ENST00000511263 607 ntBASIC4.94□□□□□ -1.62
LSM1O15116 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.94□□□□□ -1.62
LSM1O15116 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LSM1O15116 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.94□□□□□ -1.62
LSM1O15116 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.94□□□□□ -1.62
LSM1O15116 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.94□□□□□ -1.62
LSM1O15116 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.94□□□□□ -1.62
LSM1O15116 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.94□□□□□ -1.62
LSM1O15116 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LSM1O15116 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.94□□□□□ -1.62
LSM1O15116 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.94□□□□□ -1.62
LSM1O15116 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LSM1O15116 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.94□□□□□ -1.62
LSM1O15116 AC009237.17-201ENST00000618111 748 ntBASIC4.94□□□□□ -1.62
LSM1O15116 AC009704.2-201ENST00000618739 483 ntBASIC4.94□□□□□ -1.62
LSM1O15116 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.94□□□□□ -1.62
LSM1O15116 AC079298.2-201ENST00000623885 459 ntBASIC4.94□□□□□ -1.62
LSM1O15116 AC067931.1-201ENST00000624190 671 ntBASIC4.94□□□□□ -1.62
LSM1O15116 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.94□□□□□ -1.62
LSM1O15116 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.94□□□□□ -1.62
LSM1O15116 CYP4F35P-202ENST00000636121 390 ntBASIC4.94□□□□□ -1.62
LSM1O15116 AC135068.12-201ENST00000637370 931 ntBASIC4.94□□□□□ -1.62
LSM1O15116 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
LSM1O15116 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
LSM1O15116 RLIMP2-201ENST00000427891 1563 ntBASIC4.94□□□□□ -1.62
LSM1O15116 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LSM1O15116 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LSM1O15116 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.94□□□□□ -1.62
LSM1O15116 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LSM1O15116 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
LSM1O15116 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LSM1O15116 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.93□□□□□ -1.62
LSM1O15116 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LSM1O15116 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.93□□□□□ -1.62
LSM1O15116 DDX18P4-201ENST00000511690 1966 ntBASIC4.93□□□□□ -1.62
LSM1O15116 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LSM1O15116 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.93□□□□□ -1.62
LSM1O15116 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LSM1O15116 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LSM1O15116 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LSM1O15116 RNU1-94P-201ENST00000362627 173 ntBASIC4.93□□□□□ -1.62
LSM1O15116 AL353625.1-202ENST00000366273 571 ntBASIC4.93□□□□□ -1.62
LSM1O15116 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LSM1O15116 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
LSM1O15116 AL031985.1-201ENST00000392713 418 ntBASIC4.93□□□□□ -1.62
LSM1O15116 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.93□□□□□ -1.62
LSM1O15116 VN1R3-201ENST00000418822 919 ntBASIC4.93□□□□□ -1.62
LSM1O15116 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.93□□□□□ -1.62
LSM1O15116 RPS4XP16-201ENST00000427198 791 ntBASIC4.93□□□□□ -1.62
LSM1O15116 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.93□□□□□ -1.62
LSM1O15116 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.93□□□□□ -1.62
LSM1O15116 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.93□□□□□ -1.62
LSM1O15116 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.93□□□□□ -1.62
LSM1O15116 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.93□□□□□ -1.62
LSM1O15116 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.93□□□□□ -1.62
LSM1O15116 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.93□□□□□ -1.62
LSM1O15116 NPM1P39-201ENST00000449818 867 ntBASIC4.93□□□□□ -1.62
LSM1O15116 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LSM1O15116 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.93□□□□□ -1.62
LSM1O15116 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.93□□□□□ -1.62
LSM1O15116 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.93□□□□□ -1.62
LSM1O15116 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.93□□□□□ -1.62
LSM1O15116 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.93□□□□□ -1.62
LSM1O15116 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
LSM1O15116 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.93□□□□□ -1.62
LSM1O15116 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.93□□□□□ -1.62
LSM1O15116 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.93□□□□□ -1.62
LSM1O15116 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.93□□□□□ -1.62
LSM1O15116 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.93□□□□□ -1.62
LSM1O15116 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.93□□□□□ -1.62
LSM1O15116 AC008521.2-201ENST00000591021 259 ntBASIC4.93□□□□□ -1.62
LSM1O15116 MIR6778-201ENST00000617912 73 ntBASIC4.93□□□□□ -1.62
LSM1O15116 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.93□□□□□ -1.62
LSM1O15116 AC091046.3-201ENST00000631455 1574 ntBASIC4.93□□□□□ -1.62
LSM1O15116 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.93□□□□□ -1.62
LSM1O15116 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LSM1O15116 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.93□□□□□ -1.62
LSM1O15116 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
LSM1O15116 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
LSM1O15116 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LSM1O15116 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.92□□□□□ -1.62
LSM1O15116 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.92□□□□□ -1.62
LSM1O15116 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.92□□□□□ -1.62
LSM1O15116 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LSM1O15116 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LSM1O15116 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
LSM1O15116 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
LSM1O15116 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
LSM1O15116 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.92□□□□□ -1.62
LSM1O15116 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
LSM1O15116 LAP3P1-201ENST00000403648 294 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 490.8 ms