Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SOX1O00570 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.92□□□□□ -1.3
SOX1O00570 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.92□□□□□ -1.3
SOX1O00570 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.92□□□□□ -1.3
SOX1O00570 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SOX1O00570 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
SOX1O00570 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
SOX1O00570 AC125238.2-201ENST00000430003 1440 ntBASIC6.92□□□□□ -1.3
SOX1O00570 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SOX1O00570 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC6.92□□□□□ -1.3
SOX1O00570 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SOX1O00570 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SOX1O00570 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SOX1O00570 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC6.92□□□□□ -1.3
SOX1O00570 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC6.91□□□□□ -1.3
SOX1O00570 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SOX1O00570 ANKRD20A10P-201ENST00000457591 1515 ntBASIC6.91□□□□□ -1.3
SOX1O00570 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
SOX1O00570 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
SOX1O00570 AF287957.1-201ENST00000607368 1595 ntBASIC6.91□□□□□ -1.3
SOX1O00570 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
SOX1O00570 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
SOX1O00570 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC6.91□□□□□ -1.3
SOX1O00570 CREM-208ENST00000361599 2170 ntTSL 5 BASIC6.91□□□□□ -1.3
SOX1O00570 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SOX1O00570 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SOX1O00570 GAPDHP24-201ENST00000328713 983 ntBASIC6.91□□□□□ -1.3
SOX1O00570 RNU6-181P-201ENST00000363225 107 ntBASIC6.91□□□□□ -1.3
SOX1O00570 Y_RNA.311-201ENST00000365068 96 ntBASIC6.91□□□□□ -1.3
SOX1O00570 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SOX1O00570 AL133270.1-201ENST00000402635 279 ntBASIC6.91□□□□□ -1.3
SOX1O00570 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.91□□□□□ -1.3
SOX1O00570 RN7SKP125-201ENST00000410481 302 ntBASIC6.91□□□□□ -1.3
SOX1O00570 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC6.91□□□□□ -1.3
SOX1O00570 AC138393.2-201ENST00000414742 246 ntBASIC6.91□□□□□ -1.3
SOX1O00570 AL359092.1-201ENST00000417156 265 ntBASIC6.91□□□□□ -1.3
SOX1O00570 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.91□□□□□ -1.3
SOX1O00570 AC093155.2-201ENST00000420734 937 ntBASIC6.91□□□□□ -1.3
SOX1O00570 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC6.91□□□□□ -1.3
SOX1O00570 MTND1P28-201ENST00000435623 950 ntBASIC6.91□□□□□ -1.3
SOX1O00570 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.91□□□□□ -1.3
SOX1O00570 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC6.91□□□□□ -1.3
SOX1O00570 AL645937.3-201ENST00000453647 936 ntBASIC6.91□□□□□ -1.3
SOX1O00570 RFC5P1-201ENST00000454419 874 ntBASIC6.91□□□□□ -1.3
SOX1O00570 UBDP1-202ENST00000457888 382 ntBASIC6.91□□□□□ -1.3
SOX1O00570 AL133445.1-201ENST00000467051 452 ntBASIC6.91□□□□□ -1.3
SOX1O00570 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC6.91□□□□□ -1.3
SOX1O00570 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC6.91□□□□□ -1.3
SOX1O00570 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC6.91□□□□□ -1.3
SOX1O00570 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC6.91□□□□□ -1.3
SOX1O00570 UBE2CP1-201ENST00000557130 554 ntBASIC6.91□□□□□ -1.3
SOX1O00570 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.91□□□□□ -1.3
SOX1O00570 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC6.91□□□□□ -1.3
SOX1O00570 RN7SL208P-201ENST00000577964 296 ntBASIC6.91□□□□□ -1.3
SOX1O00570 AC090236.2-201ENST00000587933 1101 ntBASIC6.91□□□□□ -1.3
SOX1O00570 AC004890.3-201ENST00000605566 1095 ntBASIC6.91□□□□□ -1.3
SOX1O00570 AC006566.1-201ENST00000608943 513 ntBASIC6.91□□□□□ -1.3
SOX1O00570 AL121757.2-201ENST00000611223 313 ntBASIC6.91□□□□□ -1.3
SOX1O00570 Y_RNA.804-201ENST00000615262 101 ntBASIC6.91□□□□□ -1.3
SOX1O00570 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SOX1O00570 AC069209.1-201ENST00000619282 651 ntBASIC6.91□□□□□ -1.3
SOX1O00570 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
SOX1O00570 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
SOX1O00570 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
SOX1O00570 SALL1P1-201ENST00000438101 3837 ntBASIC6.91□□□□□ -1.3
SOX1O00570 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.91□□□□□ -1.3
SOX1O00570 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SOX1O00570 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SOX1O00570 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC6.9□□□□□ -1.3
SOX1O00570 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
SOX1O00570 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC6.9□□□□□ -1.3
SOX1O00570 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.9□□□□□ -1.3
SOX1O00570 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.9□□□□□ -1.3
SOX1O00570 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.9□□□□□ -1.3
SOX1O00570 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SOX1O00570 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SOX1O00570 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.9□□□□□ -1.3
SOX1O00570 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SOX1O00570 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SOX1O00570 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SOX1O00570 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
SOX1O00570 XIST-206ENST00000434839 2865 ntTSL 5 BASIC6.9□□□□□ -1.3
SOX1O00570 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
SOX1O00570 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
SOX1O00570 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SOX1O00570 OR9G4-201ENST00000302957 984 ntBASIC6.9□□□□□ -1.3
SOX1O00570 RNU4-12P-201ENST00000365233 139 ntBASIC6.9□□□□□ -1.3
SOX1O00570 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
SOX1O00570 RNU5A-6P-201ENST00000384136 116 ntBASIC6.9□□□□□ -1.3
SOX1O00570 Y_RNA.582-201ENST00000391023 95 ntBASIC6.9□□□□□ -1.3
SOX1O00570 RN7SKP281-201ENST00000410472 352 ntBASIC6.9□□□□□ -1.3
SOX1O00570 RN7SKP296-201ENST00000411185 341 ntBASIC6.9□□□□□ -1.3
SOX1O00570 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.9□□□□□ -1.3
SOX1O00570 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC6.9□□□□□ -1.3
SOX1O00570 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC6.9□□□□□ -1.3
SOX1O00570 AL022100.1-202ENST00000421214 548 ntBASIC6.9□□□□□ -1.3
SOX1O00570 AC012498.1-201ENST00000424037 437 ntBASIC6.9□□□□□ -1.3
SOX1O00570 AC130360.1-201ENST00000425489 1117 ntBASIC6.9□□□□□ -1.3
SOX1O00570 AL590762.4-201ENST00000425885 253 ntBASIC6.9□□□□□ -1.3
SOX1O00570 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms