Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
FOXN3O00409 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.92□□□□□ -1.46
FOXN3O00409 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
FOXN3O00409 VN2R3P-201ENST00000422626 1412 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
FOXN3O00409 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.91□□□□□ -1.46
FOXN3O00409 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
FOXN3O00409 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
FOXN3O00409 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
FOXN3O00409 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
FOXN3O00409 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
FOXN3O00409 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
FOXN3O00409 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
FOXN3O00409 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.91□□□□□ -1.46
FOXN3O00409 RN7SKP292-201ENST00000365522 317 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 RPL5P19-201ENST00000404228 893 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 MTCO2P8-201ENST00000412213 658 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 UBE2V1P9-201ENST00000414760 368 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 IPPKP1-201ENST00000422501 768 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 AL133173.1-201ENST00000423458 397 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.91□□□□□ -1.46
FOXN3O00409 MTCO2P17-201ENST00000424336 677 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.91□□□□□ -1.46
FOXN3O00409 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.91□□□□□ -1.46
FOXN3O00409 OR6D1P-201ENST00000436165 939 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
FOXN3O00409 RPL34P26-201ENST00000445636 354 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 EEF1B2P6-201ENST00000445713 673 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
FOXN3O00409 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC5.91□□□□□ -1.46
FOXN3O00409 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
FOXN3O00409 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.91□□□□□ -1.46
FOXN3O00409 RPS4XP6-201ENST00000477670 797 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 AC037198.2-201ENST00000478845 733 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.91□□□□□ -1.46
FOXN3O00409 TRAV31-201ENST00000502780 342 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.91□□□□□ -1.46
FOXN3O00409 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
FOXN3O00409 AC097486.1-201ENST00000515331 210 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.91□□□□□ -1.46
FOXN3O00409 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.91□□□□□ -1.46
FOXN3O00409 MRPS21P7-201ENST00000566937 238 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 AP005403.1-201ENST00000579720 229 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 SS18L2P2-201ENST00000583960 235 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 MTCO2P2-201ENST00000591258 225 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
FOXN3O00409 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.91□□□□□ -1.46
FOXN3O00409 AC090525.3-201ENST00000605601 189 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 AC063944.3-201ENST00000609969 533 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 AC022079.2-201ENST00000619739 566 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.91□□□□□ -1.46
FOXN3O00409 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.91□□□□□ -1.46
FOXN3O00409 AC073869.8-201ENST00000641806 335 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
FOXN3O00409 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
FOXN3O00409 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
FOXN3O00409 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
FOXN3O00409 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
FOXN3O00409 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.91□□□□□ -1.46
FOXN3O00409 AL132640.2-201ENST00000559968 1698 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
FOXN3O00409 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
FOXN3O00409 MTCO1P18-201ENST00000455518 1419 ntBASIC5.91□□□□□ -1.46
FOXN3O00409 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
FOXN3O00409 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
FOXN3O00409 ADAM24P-201ENST00000398655 2101 ntBASIC5.9□□□□□ -1.46
FOXN3O00409 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
FOXN3O00409 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
FOXN3O00409 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
FOXN3O00409 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
FOXN3O00409 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
FOXN3O00409 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.9□□□□□ -1.46
FOXN3O00409 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
FOXN3O00409 RN7SKP6-201ENST00000364795 319 ntBASIC5.9□□□□□ -1.46
FOXN3O00409 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.9□□□□□ -1.46
FOXN3O00409 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
FOXN3O00409 RNU4-31P-201ENST00000384211 141 ntBASIC5.9□□□□□ -1.46
FOXN3O00409 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
FOXN3O00409 AC233289.1-201ENST00000403700 508 ntBASIC5.9□□□□□ -1.46
FOXN3O00409 PPIAP9-201ENST00000403866 498 ntBASIC5.9□□□□□ -1.46
FOXN3O00409 GAPDHP42-201ENST00000406848 981 ntBASIC5.9□□□□□ -1.46
FOXN3O00409 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.9□□□□□ -1.46
FOXN3O00409 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.9□□□□□ -1.46
FOXN3O00409 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.9□□□□□ -1.46
FOXN3O00409 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.9□□□□□ -1.46
FOXN3O00409 RPS4XP16-201ENST00000427198 791 ntBASIC5.9□□□□□ -1.46
FOXN3O00409 USP12PY-201ENST00000427677 1064 ntBASIC5.9□□□□□ -1.46
FOXN3O00409 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.9□□□□□ -1.46
FOXN3O00409 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
FOXN3O00409 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.9□□□□□ -1.46
FOXN3O00409 AC073109.1-201ENST00000445066 978 ntBASIC5.9□□□□□ -1.46
FOXN3O00409 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.9□□□□□ -1.46
FOXN3O00409 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.9□□□□□ -1.46
FOXN3O00409 TPT1P1-201ENST00000458495 518 ntBASIC5.9□□□□□ -1.46
FOXN3O00409 AC084754.1-201ENST00000463466 464 ntBASIC5.9□□□□□ -1.46
FOXN3O00409 AC094085.1-201ENST00000468914 584 ntBASIC5.9□□□□□ -1.46
FOXN3O00409 RPSAP51-201ENST00000497462 645 ntBASIC5.9□□□□□ -1.46
FOXN3O00409 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
FOXN3O00409 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms