Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AC016739.1-201ENST00000405359 345 ntBASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AL603766.1-201ENST00000407763 664 ntBASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 UBTFL2-201ENST00000411859 1191 ntBASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 EIF2S2P3-201ENST00000428356 999 ntBASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 RPL37P1-201ENST00000432310 284 ntBASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AC023347.2-201ENST00000433994 462 ntBASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 RN7SL727P-201ENST00000482164 296 ntBASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 RN7SL655P-201ENST00000486087 298 ntBASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AC010468.3-201ENST00000508225 458 ntBASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AC109481.1-201ENST00000509173 282 ntBASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AC096996.1-201ENST00000563813 325 ntBASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AP003117.2-201ENST00000606010 545 ntBASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AL121985.3-201ENST00000620690 523 ntBASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
HMGB1P1B2RPK0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
HMGB1P1B2RPK0 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.65□□□□□ -1.51
HMGB1P1B2RPK0 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
HMGB1P1B2RPK0 SAGE2P-201ENST00000420011 2126 ntBASIC5.65□□□□□ -1.51
HMGB1P1B2RPK0 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.65□□□□□ -1.51
HMGB1P1B2RPK0 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
HMGB1P1B2RPK0 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 RNU6-543P-201ENST00000362576 108 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 OR52E6-202ENST00000379946 954 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 RNU2-65P-201ENST00000410162 185 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 AC006509.1-201ENST00000420788 634 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 ELOCP3-201ENST00000439303 348 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 OR52U1P-201ENST00000439752 923 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 BMS1P11-201ENST00000442351 885 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 GTF3AP5-201ENST00000442645 697 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 MTND2P30-201ENST00000456663 382 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 BMS1P9-201ENST00000457640 885 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 AC092865.4-201ENST00000477936 615 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 AP000926.1-201ENST00000479573 241 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 RN7SL273P-201ENST00000481561 299 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 AC073522.1-201ENST00000483312 377 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 HMGB1P21-201ENST00000502313 581 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 AC105391.1-201ENST00000503155 1045 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 IGBP1P5-201ENST00000507524 1000 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 RPL7L1P13-201ENST00000511702 739 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 OSTC-204ENST00000512478 663 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 AC133963.2-201ENST00000513686 578 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 AC008494.2-201ENST00000514544 370 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 HMGN1P9-201ENST00000515212 298 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 RNU6-1102P-201ENST00000516149 96 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 HMGB1P19-201ENST00000517578 577 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 OSBPL9P3-201ENST00000534523 595 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 TDGP1-201ENST00000543961 1229 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 OR11H3P-201ENST00000554547 982 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 H3F3BP2-201ENST00000583907 357 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 KATNBL1P5-201ENST00000605015 517 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms