Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC074141.1-201ENST00000588129 2995 ntBASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 OFD1P8Y-201ENST00000449148 1433 ntBASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 C4BPAP1-201ENST00000415474 1893 ntBASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 AL161912.4-201ENST00000623889 2468 ntBASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 RNU6-317P-201ENST00000384031 107 ntBASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 Y_RNA.516-201ENST00000384541 124 ntBASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 NPM1P4-201ENST00000414095 812 ntBASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 BX284632.2-201ENST00000421091 399 ntBASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 GSTA6P-201ENST00000424144 582 ntBASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 UBE2FP3-201ENST00000436366 524 ntBASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 ANKRD30BP3-201ENST00000444850 1070 ntBASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 FTH1P2-201ENST00000466086 412 ntBASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 RPL9P33-201ENST00000484311 566 ntBASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 ARL2BPP4-201ENST00000506854 471 ntBASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 AC239860.2-201ENST00000525886 270 ntBASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 AP000648.1-201ENST00000529682 397 ntBASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 AC012414.6-201ENST00000568241 401 ntBASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 AC106785.4-201ENST00000569492 412 ntBASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 COX6CP7-201ENST00000597056 208 ntBASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 AL157899.1-201ENST00000604110 936 ntBASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 AC024940.4-201ENST00000605507 246 ntBASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 AC055764.2-201ENST00000610089 670 ntBASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 AL356266.1-201ENST00000623311 483 ntBASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 AC011592.1-201ENST00000624647 3634 ntBASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 AC137056.2-201ENST00000624055 1958 ntBASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 AC096992.2-201ENST00000609553 1684 ntBASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
TMEM88BA6NKF7 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 FGF7P2-201ENST00000332473 296 ntBASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 SNORD16-201ENST00000362803 99 ntBASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 SUGT1P1-201ENST00000379514 476 ntBASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 Y_RNA.408-201ENST00000383987 102 ntBASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 RN7SKP33-201ENST00000410942 340 ntBASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 RPL21P108-201ENST00000413857 481 ntBASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 RPS7P13-201ENST00000413955 498 ntBASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 AC004448.2-201ENST00000422360 586 ntBASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 ARAFP2-201ENST00000440565 559 ntBASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 AL592447.1-201ENST00000447592 540 ntBASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 AC073850.1-201ENST00000449243 255 ntBASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 HIGD1AP16-201ENST00000450986 258 ntBASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 OR6C5P-201ENST00000452388 923 ntBASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 RPL23AP71-201ENST00000470966 469 ntBASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 AL161747.1-201ENST00000480068 358 ntBASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 AC109471.1-201ENST00000511631 612 ntBASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 AC087883.1-201ENST00000551882 391 ntBASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms