Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC092647.2-201ENST00000452998 253 ntBASIC6.09□□□□□ -1.43
CTNNA3Q9UI47 RN7SL441P-201ENST00000492388 296 ntBASIC6.09□□□□□ -1.43
CTNNA3Q9UI47 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.09□□□□□ -1.43
CTNNA3Q9UI47 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.09□□□□□ -1.43
CTNNA3Q9UI47 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.09□□□□□ -1.43
CTNNA3Q9UI47 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.09□□□□□ -1.43
CTNNA3Q9UI47 CR383656.6-201ENST00000550518 394 ntBASIC6.09□□□□□ -1.43
CTNNA3Q9UI47 OR11J2P-201ENST00000555298 907 ntBASIC6.09□□□□□ -1.43
CTNNA3Q9UI47 AC114947.2-201ENST00000565748 2125 ntBASIC6.09□□□□□ -1.43
CTNNA3Q9UI47 AP005262.1-201ENST00000582646 997 ntBASIC6.09□□□□□ -1.43
CTNNA3Q9UI47 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.09□□□□□ -1.43
CTNNA3Q9UI47 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.09□□□□□ -1.43
CTNNA3Q9UI47 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.09□□□□□ -1.43
CTNNA3Q9UI47 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CTNNA3Q9UI47 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6.09□□□□□ -1.43
CTNNA3Q9UI47 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CTNNA3Q9UI47 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
CTNNA3Q9UI47 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CTNNA3Q9UI47 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6.09□□□□□ -1.44
CTNNA3Q9UI47 CR382285.2-201ENST00000624662 1495 ntBASIC6.09□□□□□ -1.44
CTNNA3Q9UI47 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.09□□□□□ -1.44
CTNNA3Q9UI47 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 AC104623.2-202ENST00000623477 4002 ntBASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 HSPA8P18-201ENST00000439846 1928 ntBASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 RPL23P2-201ENST00000320371 421 ntBASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 AL353625.1-202ENST00000366273 571 ntBASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 HIGD1AP8-201ENST00000453927 274 ntBASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 RPL35AP28-201ENST00000459730 331 ntBASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 AC005412.2-201ENST00000492004 341 ntBASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 MYL12BP2-201ENST00000503948 512 ntBASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 NDUFB4P11-201ENST00000560510 395 ntBASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 TAS2R6P-201ENST00000605022 826 ntBASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 AC019072.1-201ENST00000604535 1551 ntBASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 THAP12P4-201ENST00000528321 2266 ntBASIC6.08□□□□□ -1.44
CTNNA3Q9UI47 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 UBBP2-201ENST00000376781 231 ntBASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 CYCSP24-201ENST00000445119 316 ntBASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 RPL7P61-201ENST00000451721 751 ntBASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 AC245028.2-201ENST00000458673 253 ntBASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 AC109462.1-201ENST00000491087 368 ntBASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 NIFKP7-201ENST00000503365 834 ntBASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 AP000859.1-201ENST00000525536 307 ntBASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 AL358913.1-201ENST00000554342 121 ntBASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 MTCO1P15-201ENST00000529569 1526 ntBASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms