Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC138466.2-201ENST00000540993 304 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 RPL41-204ENST00000546591 699 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 AC117372.1-201ENST00000548633 620 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 AC007424.1-203ENST00000554613 687 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 LINC02134-201ENST00000562980 557 ntTSL 5 BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 AC010650.1-201ENST00000567559 494 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 RPL23AP86-201ENST00000573796 541 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 UBE2L4-201ENST00000587688 464 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 AL121830.1-203ENST00000598694 701 ntTSL 5 BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 ZNF678-205ENST00000608949 929 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 AC019193.2-201ENST00000610012 634 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 FAM238B-204ENST00000612040 423 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 AL158801.5-201ENST00000623123 465 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 NXPH1-205ENST00000602349 1953 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 SOCS5P5-201ENST00000402732 1586 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 CYCS-201ENST00000305786 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 RBPJP7-201ENST00000442803 1447 ntBASIC9.32□□□□□ -0.92
RTN4Q9NQC3 RBPJP5-201ENST00000449433 1447 ntBASIC9.32□□□□□ -0.92
RTN4Q9NQC3 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 RNU6-223P-201ENST00000362830 107 ntBASIC9.32□□□□□ -0.92
RTN4Q9NQC3 RNU1-7P-201ENST00000364105 164 ntBASIC9.32□□□□□ -0.92
RTN4Q9NQC3 Y_RNA.535-201ENST00000384612 99 ntBASIC9.32□□□□□ -0.92
RTN4Q9NQC3 Y_RNA.548-201ENST00000384656 105 ntBASIC9.32□□□□□ -0.92
RTN4Q9NQC3 HPN-AS1-201ENST00000392227 1124 ntTSL 2 BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 ENSAP1-201ENST00000392855 326 ntBASIC9.32□□□□□ -0.92
RTN4Q9NQC3 MRM2-202ENST00000407040 582 ntTSL 3 BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 ING4-203ENST00000412586 741 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 AC009161.1-201ENST00000417306 376 ntBASIC9.32□□□□□ -0.92
RTN4Q9NQC3 AC007283.2-201ENST00000424739 197 ntBASIC9.32□□□□□ -0.92
RTN4Q9NQC3 AC152007.1-201ENST00000428521 224 ntBASIC9.32□□□□□ -0.92
RTN4Q9NQC3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 FBXO36-IT1-201ENST00000432957 582 ntTSL 3 BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 AC244505.2-201ENST00000435089 759 ntBASIC9.32□□□□□ -0.92
RTN4Q9NQC3 MRPS21P3-201ENST00000436696 262 ntBASIC9.32□□□□□ -0.92
RTN4Q9NQC3 AL590609.1-201ENST00000442164 328 ntBASIC9.32□□□□□ -0.92
RTN4Q9NQC3 AL355537.1-201ENST00000446589 450 ntTSL 2 BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 AF186996.2-201ENST00000508347 907 ntBASIC9.32□□□□□ -0.92
RTN4Q9NQC3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 RNA5SP400-201ENST00000517155 111 ntBASIC9.32□□□□□ -0.92
RTN4Q9NQC3 TAGLN2P1-201ENST00000524097 587 ntBASIC9.32□□□□□ -0.92
RTN4Q9NQC3 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 OR5AL2P-201ENST00000532185 920 ntBASIC9.32□□□□□ -0.92
RTN4Q9NQC3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 AC011767.1-203ENST00000559762 529 ntTSL 5 BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 LINC02124-201ENST00000570087 484 ntTSL 2 BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 LINC01927-201ENST00000582231 712 ntTSL 3 BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 TBC1D29-204ENST00000584297 602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 AC115621.1-201ENST00000604653 858 ntBASIC9.32□□□□□ -0.92
RTN4Q9NQC3 AL391813.2-201ENST00000609113 322 ntBASIC9.32□□□□□ -0.92
RTN4Q9NQC3 AC215522.1-201ENST00000615488 446 ntBASIC9.32□□□□□ -0.92
RTN4Q9NQC3 MIR6776-201ENST00000616678 59 ntBASIC9.32□□□□□ -0.92
RTN4Q9NQC3 AC244100.1-202ENST00000621554 382 ntBASIC9.32□□□□□ -0.92
RTN4Q9NQC3 AC026336.5-201ENST00000624455 738 ntBASIC9.32□□□□□ -0.92
RTN4Q9NQC3 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 ADAM20P3-201ENST00000508710 2106 ntBASIC9.32□□□□□ -0.92
RTN4Q9NQC3 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
RTN4Q9NQC3 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 NXPE3-207ENST00000616286 1832 ntTSL 5 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 SSX2-202ENST00000337502 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 LST1-211ENST00000376110 433 ntTSL 3 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 CST9LP1-201ENST00000376987 444 ntBASIC9.31□□□□□ -0.92
RTN4Q9NQC3 RNU6-116P-201ENST00000384042 109 ntBASIC9.31□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms