Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 ATP5F1P3-201ENST00000397213 657 ntBASIC6.28□□□□□ -1.4
SHANK3Q9BYB0 AL607077.1-201ENST00000401718 499 ntBASIC6.28□□□□□ -1.4
SHANK3Q9BYB0 ZFRP1-201ENST00000457579 2970 ntBASIC6.28□□□□□ -1.4
SHANK3Q9BYB0 AC025164.1-201ENST00000496249 478 ntBASIC6.28□□□□□ -1.4
SHANK3Q9BYB0 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.28□□□□□ -1.4
SHANK3Q9BYB0 MTCO1P49-201ENST00000523429 802 ntBASIC6.28□□□□□ -1.4
SHANK3Q9BYB0 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.28□□□□□ -1.4
SHANK3Q9BYB0 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.28□□□□□ -1.4
SHANK3Q9BYB0 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC6.28□□□□□ -1.4
SHANK3Q9BYB0 AC024220.1-201ENST00000603675 484 ntBASIC6.28□□□□□ -1.4
SHANK3Q9BYB0 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.27□□□□□ -1.4
SHANK3Q9BYB0 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 SMG1P7-201ENST00000565246 2704 ntBASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 GAPDHP14-201ENST00000450472 937 ntBASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 FPGT-203ENST00000467578 601 ntTSL 2 BASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 NDUFB4P11-201ENST00000560510 395 ntBASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 AC100847.1-201ENST00000611316 481 ntBASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SHANK3Q9BYB0 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 RN7SKP280-201ENST00000364196 304 ntBASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 RNA5SP509-201ENST00000364577 119 ntBASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 OR1L6-202ENST00000373684 1044 ntBASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 OR6C69P-201ENST00000394268 893 ntBASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 ST13P16-201ENST00000401760 781 ntBASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 ARL4AP5-201ENST00000404372 599 ntBASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 RN7SKP17-201ENST00000411242 351 ntBASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 UQCRBP1-201ENST00000421129 336 ntBASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 AC091390.3-201ENST00000426478 338 ntBASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 AC108751.3-201ENST00000461814 1020 ntBASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 AC073358.1-201ENST00000505671 684 ntBASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 HNRNPRP2-201ENST00000528421 743 ntBASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 AC022916.3-201ENST00000592961 742 ntBASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 AC012409.3-201ENST00000611343 981 ntBASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 AC114781.5-201ENST00000615297 108 ntBASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 AC026367.3-201ENST00000619032 590 ntBASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 AC012213.2-201ENST00000562917 4597 ntBASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 AC007529.1-201ENST00000418574 2178 ntBASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 AC005261.2-201ENST00000593427 4258 ntBASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 AC010401.2-201ENST00000575137 4934 ntBASIC6.26□□□□□ -1.41
SHANK3Q9BYB0 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SHANK3Q9BYB0 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SHANK3Q9BYB0 RNA5SP241-201ENST00000391326 114 ntBASIC6.25□□□□□ -1.41
SHANK3Q9BYB0 LINC00993-201ENST00000420453 540 ntBASIC6.25□□□□□ -1.41
SHANK3Q9BYB0 RPS3AP54-201ENST00000435535 734 ntBASIC6.25□□□□□ -1.41
SHANK3Q9BYB0 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC6.25□□□□□ -1.41
SHANK3Q9BYB0 snoU13.24-201ENST00000458998 104 ntBASIC6.25□□□□□ -1.41
SHANK3Q9BYB0 RN7SL197P-201ENST00000466981 299 ntBASIC6.25□□□□□ -1.41
SHANK3Q9BYB0 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC6.25□□□□□ -1.41
SHANK3Q9BYB0 RNU1-6P-201ENST00000516290 144 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms