Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 TXNP7-201ENST00000406296 293 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 RN7SKP293-201ENST00000411389 296 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 RPS3AP3-201ENST00000411933 242 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 HMGB3P31-201ENST00000413333 595 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AC006065.1-201ENST00000422539 802 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 RPL7AP14-201ENST00000424041 802 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 RPL35AP12-201ENST00000425362 338 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 CXCR2P1-202ENST00000443392 1074 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AC023274.2-201ENST00000445264 521 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 HMGB1P16-201ENST00000447155 540 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AC092570.2-201ENST00000452117 1143 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AC009963.2-201ENST00000453431 138 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AC027575.1-201ENST00000481064 460 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 THAP6-203ENST00000502620 582 ntTSL 3 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AC010493.1-201ENST00000513479 292 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 RNU6-789P-201ENST00000517105 102 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 OR8A2P-201ENST00000528631 952 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 SERPINA15P-201ENST00000529287 266 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AL390334.1-201ENST00000556395 450 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AC005021.1-201ENST00000608730 355 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AP000550.3-201ENST00000637734 379 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 ZNF610-207ENST00000601151 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 ACTR6-201ENST00000188312 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 ANKRD6-218ENST00000522441 3157 ntAPPRIS ALT1 TSL 2 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AL121936.1-201ENST00000641660 2884 ntBASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL25A1Q9BXS0 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
COL25A1Q9BXS0 WDR44-203ENST00000371825 4029 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
COL25A1Q9BXS0 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
COL25A1Q9BXS0 TNFRSF10D-201ENST00000312584 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
COL25A1Q9BXS0 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC7.09□□□□□ -1.28
COL25A1Q9BXS0 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.09□□□□□ -1.28
COL25A1Q9BXS0 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC7.09□□□□□ -1.28
COL25A1Q9BXS0 AC023818.2-201ENST00000623817 2304 ntBASIC7.09□□□□□ -1.28
COL25A1Q9BXS0 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 SOX6-210ENST00000528252 2707 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 UGT2B25P-201ENST00000511504 1586 ntBASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 ENY2-211ENST00000521688 2922 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 U3.7-201ENST00000363668 216 ntBASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 Y_RNA.307-201ENST00000365022 117 ntBASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 Y_RNA.387-201ENST00000383918 102 ntBASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 AL356967.1-201ENST00000406305 431 ntBASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 OR3A2-201ENST00000408891 1076 ntBASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 BX295541.1-201ENST00000417774 250 ntBASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 FCF1P1-201ENST00000432690 571 ntBASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 AL135752.1-201ENST00000479477 471 ntBASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 RNA5SP228-201ENST00000516232 133 ntBASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 RNU6-943P-201ENST00000516960 98 ntBASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 AC112191.2-201ENST00000522428 333 ntBASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 AC012507.3-201ENST00000603556 477 ntBASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 RPSAP75-201ENST00000605848 301 ntBASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 AC090948.2-201ENST00000607363 564 ntBASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 MIR7155-201ENST00000615925 56 ntBASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 AC132825.8-201ENST00000640783 297 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms