Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC007738.1-201ENST00000413892 348 ntBASIC7□□□□□ -1.29
SIN3AQ96ST3 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC7□□□□□ -1.29
SIN3AQ96ST3 YY1P1-201ENST00000427625 668 ntBASIC7□□□□□ -1.29
SIN3AQ96ST3 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC7□□□□□ -1.29
SIN3AQ96ST3 TPTE2P1-204ENST00000435256 593 ntBASIC7□□□□□ -1.29
SIN3AQ96ST3 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC7□□□□□ -1.29
SIN3AQ96ST3 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC7□□□□□ -1.29
SIN3AQ96ST3 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC7□□□□□ -1.29
SIN3AQ96ST3 SBDSP1-204ENST00000453858 737 ntBASIC7□□□□□ -1.29
SIN3AQ96ST3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC7□□□□□ -1.29
SIN3AQ96ST3 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC7□□□□□ -1.29
SIN3AQ96ST3 SCARNA22-201ENST00000503991 125 ntBASIC7□□□□□ -1.29
SIN3AQ96ST3 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC7□□□□□ -1.29
SIN3AQ96ST3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC7□□□□□ -1.29
SIN3AQ96ST3 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC7□□□□□ -1.29
SIN3AQ96ST3 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC7□□□□□ -1.29
SIN3AQ96ST3 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC7□□□□□ -1.29
SIN3AQ96ST3 AP005901.4-201ENST00000577336 569 ntBASIC7□□□□□ -1.29
SIN3AQ96ST3 RN7SL802P-201ENST00000577858 299 ntBASIC7□□□□□ -1.29
SIN3AQ96ST3 AP000919.1-201ENST00000582850 985 ntBASIC7□□□□□ -1.29
SIN3AQ96ST3 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC7□□□□□ -1.29
SIN3AQ96ST3 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC7□□□□□ -1.29
SIN3AQ96ST3 AL161912.3-201ENST00000605404 628 ntBASIC7□□□□□ -1.29
SIN3AQ96ST3 AL121932.1-201ENST00000605542 214 ntBASIC7□□□□□ -1.29
SIN3AQ96ST3 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
SIN3AQ96ST3 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC7□□□□□ -1.29
SIN3AQ96ST3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SIN3AQ96ST3 AC010928.1-201ENST00000592477 1447 ntBASIC7□□□□□ -1.29
SIN3AQ96ST3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
SIN3AQ96ST3 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SIN3AQ96ST3 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SIN3AQ96ST3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.99□□□□□ -1.29
SIN3AQ96ST3 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SIN3AQ96ST3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC6.99□□□□□ -1.29
SIN3AQ96ST3 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC6.99□□□□□ -1.29
SIN3AQ96ST3 GAPDHP15-201ENST00000398586 975 ntBASIC6.99□□□□□ -1.29
SIN3AQ96ST3 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.99□□□□□ -1.29
SIN3AQ96ST3 RBMY2KP-201ENST00000418221 992 ntBASIC6.99□□□□□ -1.29
SIN3AQ96ST3 RPS17P8-201ENST00000434525 335 ntBASIC6.99□□□□□ -1.29
SIN3AQ96ST3 CYCSP11-201ENST00000436426 315 ntBASIC6.99□□□□□ -1.29
SIN3AQ96ST3 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SIN3AQ96ST3 NPM1P28-201ENST00000492269 840 ntBASIC6.99□□□□□ -1.29
SIN3AQ96ST3 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.99□□□□□ -1.29
SIN3AQ96ST3 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.99□□□□□ -1.29
SIN3AQ96ST3 AC073358.1-201ENST00000505671 684 ntBASIC6.99□□□□□ -1.29
SIN3AQ96ST3 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC6.99□□□□□ -1.29
SIN3AQ96ST3 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.99□□□□□ -1.29
SIN3AQ96ST3 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.99□□□□□ -1.29
SIN3AQ96ST3 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC6.99□□□□□ -1.29
SIN3AQ96ST3 SNORA74C-1-201ENST00000580726 201 ntBASIC6.99□□□□□ -1.29
SIN3AQ96ST3 MIR4737-201ENST00000583979 81 ntBASIC6.99□□□□□ -1.29
SIN3AQ96ST3 FAM27B-201ENST00000610601 213 ntBASIC6.99□□□□□ -1.29
SIN3AQ96ST3 MIR7703-201ENST00000620784 77 ntBASIC6.99□□□□□ -1.29
SIN3AQ96ST3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.99□□□□□ -1.29
SIN3AQ96ST3 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SIN3AQ96ST3 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SIN3AQ96ST3 SMG1P6-201ENST00000532337 2930 ntBASIC6.99□□□□□ -1.29
SIN3AQ96ST3 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
SIN3AQ96ST3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC6.99□□□□□ -1.29
SIN3AQ96ST3 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
SIN3AQ96ST3 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
SIN3AQ96ST3 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
SIN3AQ96ST3 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.98□□□□□ -1.29
SIN3AQ96ST3 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SIN3AQ96ST3 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
SIN3AQ96ST3 AL022393.1-201ENST00000625142 1677 ntBASIC6.98□□□□□ -1.29
SIN3AQ96ST3 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SIN3AQ96ST3 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
SIN3AQ96ST3 RNU1-82P-201ENST00000390851 165 ntBASIC6.98□□□□□ -1.29
SIN3AQ96ST3 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.98□□□□□ -1.29
SIN3AQ96ST3 SNORA11B-201ENST00000408175 129 ntBASIC6.98□□□□□ -1.29
SIN3AQ96ST3 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SIN3AQ96ST3 E2F6P2-201ENST00000420708 748 ntBASIC6.98□□□□□ -1.29
SIN3AQ96ST3 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.98□□□□□ -1.29
SIN3AQ96ST3 AC092162.1-201ENST00000432828 434 ntBASIC6.98□□□□□ -1.29
SIN3AQ96ST3 AL049745.1-201ENST00000433953 286 ntBASIC6.98□□□□□ -1.29
SIN3AQ96ST3 MTND4LP12-201ENST00000448237 295 ntBASIC6.98□□□□□ -1.29
SIN3AQ96ST3 SLC25A18P1-201ENST00000449385 454 ntBASIC6.98□□□□□ -1.29
SIN3AQ96ST3 RHEBP2-201ENST00000450289 600 ntBASIC6.98□□□□□ -1.29
SIN3AQ96ST3 AC092324.1-201ENST00000468671 324 ntBASIC6.98□□□□□ -1.29
SIN3AQ96ST3 AC231760.1-201ENST00000498002 260 ntBASIC6.98□□□□□ -1.29
SIN3AQ96ST3 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.98□□□□□ -1.29
SIN3AQ96ST3 TRAV11-201ENST00000539512 339 ntBASIC6.98□□□□□ -1.29
SIN3AQ96ST3 AC133555.2-201ENST00000550213 292 ntBASIC6.98□□□□□ -1.29
SIN3AQ96ST3 LSM3P2-201ENST00000551246 273 ntBASIC6.98□□□□□ -1.29
SIN3AQ96ST3 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC6.98□□□□□ -1.29
SIN3AQ96ST3 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.98□□□□□ -1.29
SIN3AQ96ST3 MIR4443-201ENST00000585052 53 ntBASIC6.98□□□□□ -1.29
SIN3AQ96ST3 AC002069.2-201ENST00000603580 883 ntBASIC6.98□□□□□ -1.29
SIN3AQ96ST3 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.98□□□□□ -1.29
SIN3AQ96ST3 AC015804.1-201ENST00000622935 435 ntBASIC6.98□□□□□ -1.29
SIN3AQ96ST3 AC002044.3-201ENST00000623314 541 ntBASIC6.98□□□□□ -1.29
SIN3AQ96ST3 NCOA4P2-201ENST00000340589 1813 ntBASIC6.98□□□□□ -1.29
SIN3AQ96ST3 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
SIN3AQ96ST3 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC6.98□□□□□ -1.29
SIN3AQ96ST3 AC104623.2-202ENST00000623477 4002 ntBASIC6.98□□□□□ -1.29
SIN3AQ96ST3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC6.97□□□□□ -1.29
SIN3AQ96ST3 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SIN3AQ96ST3 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
SIN3AQ96ST3 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms