Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.72□□□□□ -1.65
RFT1Q96AA3 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RFT1Q96AA3 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RFT1Q96AA3 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.72□□□□□ -1.65
RFT1Q96AA3 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RFT1Q96AA3 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RFT1Q96AA3 OR7E156P-201ENST00000400303 464 ntBASIC4.72□□□□□ -1.65
RFT1Q96AA3 MARK2P12-201ENST00000420129 585 ntBASIC4.72□□□□□ -1.65
RFT1Q96AA3 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.72□□□□□ -1.65
RFT1Q96AA3 AC022022.1-201ENST00000430304 178 ntBASIC4.72□□□□□ -1.65
RFT1Q96AA3 CYCSP11-201ENST00000436426 315 ntBASIC4.72□□□□□ -1.65
RFT1Q96AA3 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.72□□□□□ -1.65
RFT1Q96AA3 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.72□□□□□ -1.65
RFT1Q96AA3 MTND6P18-201ENST00000439477 513 ntBASIC4.72□□□□□ -1.65
RFT1Q96AA3 MTCYBP12-201ENST00000440559 1134 ntBASIC4.72□□□□□ -1.65
RFT1Q96AA3 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.72□□□□□ -1.65
RFT1Q96AA3 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.72□□□□□ -1.65
RFT1Q96AA3 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.72□□□□□ -1.65
RFT1Q96AA3 AC017099.1-201ENST00000448261 1028 ntBASIC4.72□□□□□ -1.65
RFT1Q96AA3 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.72□□□□□ -1.65
RFT1Q96AA3 CABYRP1-201ENST00000465493 1045 ntBASIC4.72□□□□□ -1.65
RFT1Q96AA3 AC093663.2-201ENST00000484625 313 ntBASIC4.72□□□□□ -1.65
RFT1Q96AA3 RPS24P16-201ENST00000497294 392 ntBASIC4.72□□□□□ -1.65
RFT1Q96AA3 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.72□□□□□ -1.65
RFT1Q96AA3 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.72□□□□□ -1.65
RFT1Q96AA3 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.72□□□□□ -1.65
RFT1Q96AA3 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.72□□□□□ -1.65
RFT1Q96AA3 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.72□□□□□ -1.65
RFT1Q96AA3 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.72□□□□□ -1.65
RFT1Q96AA3 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RFT1Q96AA3 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.72□□□□□ -1.65
RFT1Q96AA3 NPM1P35-201ENST00000533043 868 ntBASIC4.72□□□□□ -1.65
RFT1Q96AA3 OR8G3P-201ENST00000533406 921 ntBASIC4.72□□□□□ -1.65
RFT1Q96AA3 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.72□□□□□ -1.65
RFT1Q96AA3 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.72□□□□□ -1.65
RFT1Q96AA3 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RFT1Q96AA3 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.72□□□□□ -1.65
RFT1Q96AA3 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.72□□□□□ -1.65
RFT1Q96AA3 AC022884.2-201ENST00000578535 580 ntBASIC4.72□□□□□ -1.65
RFT1Q96AA3 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.72□□□□□ -1.65
RFT1Q96AA3 AC133552.5-201ENST00000604266 540 ntBASIC4.72□□□□□ -1.65
RFT1Q96AA3 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RFT1Q96AA3 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.72□□□□□ -1.65
RFT1Q96AA3 AC037198.3-201ENST00000616754 526 ntBASIC4.72□□□□□ -1.65
RFT1Q96AA3 FO681491.1-202ENST00000623392 737 ntBASIC4.72□□□□□ -1.65
RFT1Q96AA3 AP000648.2-201ENST00000624182 404 ntBASIC4.72□□□□□ -1.65
RFT1Q96AA3 SAMMSON-209ENST00000641222 1100 ntBASIC4.72□□□□□ -1.65
RFT1Q96AA3 AL034370.1-201ENST00000397254 1590 ntBASIC4.72□□□□□ -1.65
RFT1Q96AA3 AC024341.1-201ENST00000526444 1552 ntBASIC4.72□□□□□ -1.65
RFT1Q96AA3 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.72□□□□□ -1.65
RFT1Q96AA3 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RFT1Q96AA3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RFT1Q96AA3 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RFT1Q96AA3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.72□□□□□ -1.65
RFT1Q96AA3 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RFT1Q96AA3 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RFT1Q96AA3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RFT1Q96AA3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
RFT1Q96AA3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.65
RFT1Q96AA3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RFT1Q96AA3 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.65
RFT1Q96AA3 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.65
RFT1Q96AA3 CASC19-284ENST00000642142 1868 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 MAPK10-320ENST00000641462 6696 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFT1Q96AA3 AC007382.1-201ENST00000624376 2618 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFT1Q96AA3 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFT1Q96AA3 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 AC009501.3-201ENST00000605001 1352 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 RNA5SP433-201ENST00000364491 114 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 UBBP2-201ENST00000376781 231 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 CHMP1B2P-201ENST00000399581 597 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 AL359643.1-201ENST00000404109 423 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 MIR1271-201ENST00000408537 86 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 OR2AH1P-201ENST00000425717 928 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 CACYBPP1-201ENST00000438592 684 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 AC023512.1-201ENST00000444513 499 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 AP006222.1-205ENST00000450734 457 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFT1Q96AA3 AL645937.3-201ENST00000453647 936 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 AC021205.1-201ENST00000468797 348 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 RPS3AP15-201ENST00000483874 781 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 RN7SL170P-201ENST00000487098 295 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 RPL37P23-201ENST00000492641 294 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 OR9N1P-202ENST00000494289 481 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms