Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 RPL21P126-201ENST00000470049 478 ntBASIC8.02□□□□□ -1.13
TOPBP1Q92547 CR383656.1-201ENST00000484916 377 ntBASIC8.02□□□□□ -1.13
TOPBP1Q92547 AP002812.1-201ENST00000495378 474 ntBASIC8.02□□□□□ -1.13
TOPBP1Q92547 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC8.02□□□□□ -1.13
TOPBP1Q92547 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC8.02□□□□□ -1.13
TOPBP1Q92547 ARF4P1-201ENST00000605447 541 ntBASIC8.02□□□□□ -1.13
TOPBP1Q92547 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TOPBP1Q92547 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TOPBP1Q92547 AC138907.8-201ENST00000623981 2256 ntBASIC8.02□□□□□ -1.13
TOPBP1Q92547 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TOPBP1Q92547 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
TOPBP1Q92547 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC8.01□□□□□ -1.13
TOPBP1Q92547 UQCRC2P1-201ENST00000417777 1332 ntBASIC8.01□□□□□ -1.13
TOPBP1Q92547 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TOPBP1Q92547 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TOPBP1Q92547 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
TOPBP1Q92547 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
TOPBP1Q92547 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TOPBP1Q92547 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TOPBP1Q92547 TEX41-203ENST00000420472 765 ntTSL 3 BASIC8.01□□□□□ -1.13
TOPBP1Q92547 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TOPBP1Q92547 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC8.01□□□□□ -1.13
TOPBP1Q92547 RNA5SP143-201ENST00000516936 115 ntBASIC8.01□□□□□ -1.13
TOPBP1Q92547 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC8.01□□□□□ -1.13
TOPBP1Q92547 AC006133.1-201ENST00000617106 264 ntBASIC8.01□□□□□ -1.13
TOPBP1Q92547 U3.53-201ENST00000628922 216 ntBASIC8.01□□□□□ -1.13
TOPBP1Q92547 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TOPBP1Q92547 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TOPBP1Q92547 MAK-202ENST00000354489 3941 ntTSL 5 BASIC8.01□□□□□ -1.13
TOPBP1Q92547 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC8□□□□□ -1.13
TOPBP1Q92547 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC8□□□□□ -1.13
TOPBP1Q92547 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC8□□□□□ -1.13
TOPBP1Q92547 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC8□□□□□ -1.13
TOPBP1Q92547 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC8□□□□□ -1.13
TOPBP1Q92547 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
TOPBP1Q92547 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
TOPBP1Q92547 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC8□□□□□ -1.13
TOPBP1Q92547 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
TOPBP1Q92547 ZNF137P-201ENST00000456718 1920 ntBASIC8□□□□□ -1.13
TOPBP1Q92547 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
TOPBP1Q92547 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC8□□□□□ -1.13
TOPBP1Q92547 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC8□□□□□ -1.13
TOPBP1Q92547 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC8□□□□□ -1.13
TOPBP1Q92547 RPS17P8-201ENST00000434525 335 ntBASIC8□□□□□ -1.13
TOPBP1Q92547 AC004980.3-201ENST00000447046 365 ntBASIC8□□□□□ -1.13
TOPBP1Q92547 GAPDHP14-201ENST00000450472 937 ntBASIC8□□□□□ -1.13
TOPBP1Q92547 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC8□□□□□ -1.13
TOPBP1Q92547 CARD16-203ENST00000525374 503 ntTSL 3 BASIC8□□□□□ -1.13
TOPBP1Q92547 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC8□□□□□ -1.13
TOPBP1Q92547 RN7SL652P-201ENST00000577769 300 ntBASIC8□□□□□ -1.13
TOPBP1Q92547 AC022916.3-201ENST00000592961 742 ntBASIC8□□□□□ -1.13
TOPBP1Q92547 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC8□□□□□ -1.13
TOPBP1Q92547 AC112200.1-201ENST00000625015 234 ntBASIC8□□□□□ -1.13
TOPBP1Q92547 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
TOPBP1Q92547 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
TOPBP1Q92547 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC8□□□□□ -1.13
TOPBP1Q92547 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC8□□□□□ -1.13
TOPBP1Q92547 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
TOPBP1Q92547 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC8□□□□□ -1.13
TOPBP1Q92547 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
TOPBP1Q92547 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC7.99□□□□□ -1.13
TOPBP1Q92547 AL731532.1-201ENST00000623972 4236 ntBASIC7.99□□□□□ -1.13
TOPBP1Q92547 RPL17P50-201ENST00000396131 546 ntBASIC7.99□□□□□ -1.13
TOPBP1Q92547 RPS29P17-201ENST00000430795 166 ntBASIC7.99□□□□□ -1.13
TOPBP1Q92547 TEX41-206ENST00000432608 661 ntTSL 3 BASIC7.99□□□□□ -1.13
TOPBP1Q92547 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC7.99□□□□□ -1.13
TOPBP1Q92547 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC7.99□□□□□ -1.13
TOPBP1Q92547 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
TOPBP1Q92547 AC027369.5-201ENST00000533838 755 ntBASIC7.99□□□□□ -1.13
TOPBP1Q92547 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
TOPBP1Q92547 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC7.99□□□□□ -1.13
TOPBP1Q92547 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC7.99□□□□□ -1.13
TOPBP1Q92547 RN7SL290P-201ENST00000578661 300 ntBASIC7.99□□□□□ -1.13
TOPBP1Q92547 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC7.99□□□□□ -1.13
TOPBP1Q92547 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
TOPBP1Q92547 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
TOPBP1Q92547 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC7.99□□□□□ -1.13
TOPBP1Q92547 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
TOPBP1Q92547 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC7.99□□□□□ -1.13
TOPBP1Q92547 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
TOPBP1Q92547 SNORA71.2-201ENST00000364941 134 ntBASIC7.98□□□□□ -1.13
TOPBP1Q92547 PPIAP31-201ENST00000405422 495 ntBASIC7.98□□□□□ -1.13
TOPBP1Q92547 RN7SKP16-201ENST00000410180 299 ntBASIC7.98□□□□□ -1.13
TOPBP1Q92547 NDUFA5P1-201ENST00000433858 341 ntBASIC7.98□□□□□ -1.13
TOPBP1Q92547 NUTF2P3-201ENST00000448540 384 ntBASIC7.98□□□□□ -1.13
TOPBP1Q92547 RN7SL558P-201ENST00000497468 299 ntBASIC7.98□□□□□ -1.13
TOPBP1Q92547 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC7.98□□□□□ -1.13
TOPBP1Q92547 AC053481.3-201ENST00000577881 843 ntBASIC7.98□□□□□ -1.13
TOPBP1Q92547 MTCYBP13-201ENST00000578634 1093 ntBASIC7.98□□□□□ -1.13
TOPBP1Q92547 MIR4444-1-201ENST00000581696 74 ntBASIC7.98□□□□□ -1.13
TOPBP1Q92547 MIR4444-2-201ENST00000584390 74 ntBASIC7.98□□□□□ -1.13
TOPBP1Q92547 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC7.98□□□□□ -1.13
TOPBP1Q92547 AL133243.1-201ENST00000614487 366 ntBASIC7.98□□□□□ -1.13
TOPBP1Q92547 AC243960.7-201ENST00000623532 707 ntBASIC7.98□□□□□ -1.13
TOPBP1Q92547 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TOPBP1Q92547 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC7.98□□□□□ -1.13
TOPBP1Q92547 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
TOPBP1Q92547 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
TOPBP1Q92547 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TOPBP1Q92547 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms