Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AL359091.2-201ENST00000609303 556 ntBASIC5.42□□□□□ -1.54
CPEB3Q8NE35 AC073114.1-201ENST00000612027 490 ntBASIC5.42□□□□□ -1.54
CPEB3Q8NE35 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.42□□□□□ -1.54
CPEB3Q8NE35 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CPEB3Q8NE35 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CPEB3Q8NE35 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.42□□□□□ -1.54
CPEB3Q8NE35 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CPEB3Q8NE35 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.42□□□□□ -1.54
CPEB3Q8NE35 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CPEB3Q8NE35 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.42□□□□□ -1.54
CPEB3Q8NE35 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.42□□□□□ -1.54
CPEB3Q8NE35 MTCO1P28-201ENST00000574177 1528 ntBASIC5.42□□□□□ -1.54
CPEB3Q8NE35 AC090181.3-201ENST00000624777 1514 ntBASIC5.42□□□□□ -1.54
CPEB3Q8NE35 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.42□□□□□ -1.54
CPEB3Q8NE35 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CPEB3Q8NE35 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.42□□□□□ -1.54
CPEB3Q8NE35 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CPEB3Q8NE35 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.42□□□□□ -1.54
CPEB3Q8NE35 AP000526.1-201ENST00000603308 1388 ntBASIC5.42□□□□□ -1.54
CPEB3Q8NE35 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 SNORA43.1-201ENST00000364863 140 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 MIR188-201ENST00000385034 86 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 ATP5HP3-201ENST00000396994 486 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 PEX12P1-201ENST00000400284 1048 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 RN7SKP144-201ENST00000411108 279 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 RAD23BP2-201ENST00000416003 1207 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 TAF13P2-201ENST00000416876 286 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 LINC01347-201ENST00000417964 355 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AC098592.1-201ENST00000419352 333 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AC007562.1-201ENST00000421819 517 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AC006065.1-201ENST00000422539 802 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 C8orf59P1-201ENST00000429930 303 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 NMNAT1P2-201ENST00000435192 860 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 GAPDHP23-201ENST00000444823 993 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AC023274.2-201ENST00000445264 521 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 NDUFAF4P4-201ENST00000454883 502 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AL109741.2-201ENST00000455561 343 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 RNU7-140P-201ENST00000459546 60 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 RN7SL254P-201ENST00000460609 284 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AL117692.1-201ENST00000494283 713 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 SNX18P24-201ENST00000505249 671 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AC002519.2-203ENST00000567043 837 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AC134669.1-201ENST00000581275 672 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 RSL24D1P11-201ENST00000591045 491 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AP003465.2-201ENST00000602571 373 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AC018618.2-201ENST00000604770 446 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AC011374.2-201ENST00000607135 526 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AL135999.3-201ENST00000610501 812 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AC105227.2-201ENST00000615075 605 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AF246928.1-201ENST00000623768 87 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AC007494.3-201ENST00000624660 743 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 FP325313.1-201ENST00000638228 703 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 AC116667.2-201ENST00000641075 823 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 EIF3EP1-201ENST00000433978 1316 ntBASIC5.41□□□□□ -1.54
CPEB3Q8NE35 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CPEB3Q8NE35 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms