Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 LINC02019-201ENST00000608605 2060 ntBASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC33Q8N5R6 AC114786.1-201ENST00000512892 1415 ntBASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AC114774.1-201ENST00000507410 1770 ntBASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 RNU5B-4P-201ENST00000363508 111 ntBASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 RNU6-532P-201ENST00000384318 107 ntBASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AC023128.2-201ENST00000420880 1223 ntBASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 OR6K4P-201ENST00000423179 955 ntBASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 DEFB130D-201ENST00000426866 237 ntBASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AL022331.1-201ENST00000429025 477 ntBASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AL390119.1-201ENST00000440329 312 ntBASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 snoU109.3-201ENST00000459477 145 ntBASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AC008427.1-201ENST00000503102 655 ntBASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 BX510359.5-201ENST00000515651 304 ntBASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AC010376.1-201ENST00000522101 334 ntBASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AC069431.2-201ENST00000604149 1099 ntBASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AP002802.2-201ENST00000605877 235 ntBASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AC018754.1-201ENST00000607486 925 ntBASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AL121652.1-201ENST00000608851 448 ntBASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AC084824.4-201ENST00000620106 731 ntBASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 RLIMP2-201ENST00000427891 1563 ntBASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 YES1P1-201ENST00000418510 1628 ntBASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AC017007.4-201ENST00000503353 1352 ntBASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC33Q8N5R6 AC109446.4-201ENST00000623235 2755 ntBASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 GAPDHP24-201ENST00000328713 983 ntBASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 AL159987.1-201ENST00000347911 293 ntBASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 RNA5SP326-201ENST00000363209 110 ntBASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 RNU5E-10P-201ENST00000363506 118 ntBASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 U3.7-201ENST00000363668 216 ntBASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 RNU6-171P-201ENST00000384354 107 ntBASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 MIR105-2-201ENST00000385083 81 ntBASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 MIR130A-201ENST00000385274 89 ntBASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 HMGB3P7-201ENST00000400214 611 ntBASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 AC073310.1-201ENST00000423226 1033 ntBASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 AC092447.2-201ENST00000435487 669 ntBASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 ARF4P4-201ENST00000439608 520 ntBASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 SPRYD7P1-201ENST00000443861 570 ntBASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 AC097499.1-201ENST00000444277 208 ntBASIC5.9□□□□□ -1.46
CCDC33Q8N5R6 OR7E116P-201ENST00000448529 957 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms