Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 ANKRD36P1-201ENST00000344424 659 ntBASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 RNU1-134P-201ENST00000362935 165 ntBASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 RN7SKP78-201ENST00000364711 318 ntBASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 RNA5SP91-201ENST00000390902 119 ntBASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AL136310.1-201ENST00000404926 654 ntBASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 HMGB3P31-201ENST00000413333 595 ntBASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 BTF3P8-201ENST00000414577 526 ntBASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 RNGTTP1-201ENST00000420965 728 ntBASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 GAPDHP34-201ENST00000432112 823 ntBASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AC023141.3-201ENST00000436698 278 ntBASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 FTLP8-201ENST00000446770 267 ntBASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AC093166.3-201ENST00000448785 303 ntBASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 RPS6P2-201ENST00000454208 705 ntBASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AC106822.1-201ENST00000502647 526 ntBASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 IGHV3-63-201ENST00000518422 341 ntBASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AC116917.1-201ENST00000520558 305 ntBASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AC006518.2-201ENST00000542513 940 ntBASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AC009094.1-201ENST00000564443 426 ntBASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AC015819.1-201ENST00000613588 663 ntBASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 SOCS5P3-201ENST00000425115 1576 ntBASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 AP004607.3-201ENST00000530354 3915 ntBASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 ZNF876P-202ENST00000398732 1485 ntBASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTCHD4Q6ZW05 VN2R3P-201ENST00000422626 1412 ntBASIC5.31□□□□□ -1.56
PTCHD4Q6ZW05 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PTCHD4Q6ZW05 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
PTCHD4Q6ZW05 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
PTCHD4Q6ZW05 ABCC13-202ENST00000463099 3842 ntBASIC5.31□□□□□ -1.56
PTCHD4Q6ZW05 MTND5P31-201ENST00000419366 1374 ntBASIC5.31□□□□□ -1.56
PTCHD4Q6ZW05 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.31□□□□□ -1.56
PTCHD4Q6ZW05 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.31□□□□□ -1.56
PTCHD4Q6ZW05 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
PTCHD4Q6ZW05 AP001029.2-203ENST00000589795 4910 ntBASIC5.31□□□□□ -1.56
PTCHD4Q6ZW05 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PTCHD4Q6ZW05 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PTCHD4Q6ZW05 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PTCHD4Q6ZW05 AL360270.2-201ENST00000562952 5985 ntBASIC5.31□□□□□ -1.56
PTCHD4Q6ZW05 MFSD8-239ENST00000641590 2479 ntBASIC5.31□□□□□ -1.56
PTCHD4Q6ZW05 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.31□□□□□ -1.56
PTCHD4Q6ZW05 RNA5SP27-201ENST00000363839 119 ntBASIC5.31□□□□□ -1.56
PTCHD4Q6ZW05 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.31□□□□□ -1.56
PTCHD4Q6ZW05 RNU6-244P-201ENST00000391028 104 ntBASIC5.31□□□□□ -1.56
PTCHD4Q6ZW05 SNRPEP6-201ENST00000407465 277 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms