Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
TMEM53Q6P2H8 HSPA8P17-201ENST00000427029 1382 ntBASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 AL450345.1-202ENST00000605741 3881 ntBASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 RNA5SP223-201ENST00000365174 120 ntBASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 MIR143-201ENST00000385300 106 ntBASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 SNORA11.3-201ENST00000408471 128 ntBASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 AC009237.10-201ENST00000414112 510 ntBASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 IPMKP1-201ENST00000425988 855 ntBASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 RPL7AP49-201ENST00000429522 581 ntBASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 AL591438.1-201ENST00000433508 581 ntBASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 AC105399.1-202ENST00000447303 205 ntBASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 BTF3P6-201ENST00000448054 499 ntBASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 AL445433.1-201ENST00000457507 257 ntBASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 AC100832.1-201ENST00000471945 383 ntBASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 AL136038.1-201ENST00000497246 351 ntBASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 AC109464.1-201ENST00000511091 819 ntBASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 AC078878.1-201ENST00000539832 958 ntBASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 AC060766.1-201ENST00000590824 627 ntBASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 AC004477.3-201ENST00000614061 590 ntBASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 SNORA11.6-201ENST00000619030 128 ntBASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 AC073869.8-201ENST00000641806 335 ntBASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 MAPK10-286ENST00000641208 8747 ntBASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.78□□□□□ -1.64
TMEM53Q6P2H8 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 RNU6-178P-201ENST00000384631 104 ntBASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 MT-RNR1-201ENST00000389680 954 ntBASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 AL513325.1-201ENST00000417716 1034 ntBASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 NAP1L4P2-201ENST00000425958 899 ntBASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 AL357520.1-201ENST00000441557 453 ntBASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 RPS11P7-201ENST00000442125 465 ntBASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 AP000281.1-201ENST00000444036 316 ntBASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 AC090804.1-201ENST00000448870 490 ntBASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 AL672138.1-201ENST00000450604 1015 ntBASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 NIFKP7-201ENST00000503365 834 ntBASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 HMGB1P44-201ENST00000508597 572 ntBASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.77□□□□□ -1.65
TMEM53Q6P2H8 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms