Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC111000.6-201ENST00000514471 709 ntBASIC5.8□□□□□ -1.48
CCNA1P78396 RNU6-943P-201ENST00000516960 98 ntBASIC5.8□□□□□ -1.48
CCNA1P78396 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.8□□□□□ -1.48
CCNA1P78396 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.8□□□□□ -1.48
CCNA1P78396 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.8□□□□□ -1.48
CCNA1P78396 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.8□□□□□ -1.48
CCNA1P78396 AC093388.1-201ENST00000609166 430 ntBASIC5.8□□□□□ -1.48
CCNA1P78396 AC019193.2-201ENST00000610012 634 ntBASIC5.8□□□□□ -1.48
CCNA1P78396 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.8□□□□□ -1.48
CCNA1P78396 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCNA1P78396 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CCNA1P78396 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCNA1P78396 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.8□□□□□ -1.48
CCNA1P78396 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCNA1P78396 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.8□□□□□ -1.48
CCNA1P78396 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
CCNA1P78396 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
CCNA1P78396 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCNA1P78396 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
CCNA1P78396 AC093849.1-201ENST00000563631 2209 ntBASIC5.79□□□□□ -1.48
CCNA1P78396 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.79□□□□□ -1.48
CCNA1P78396 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCNA1P78396 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCNA1P78396 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.79□□□□□ -1.48
CCNA1P78396 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CCNA1P78396 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCNA1P78396 RNA5SP223-201ENST00000365174 120 ntBASIC5.79□□□□□ -1.48
CCNA1P78396 SNORA62-201ENST00000365493 153 ntBASIC5.79□□□□□ -1.48
CCNA1P78396 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCNA1P78396 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CCNA1P78396 MIR137-201ENST00000385223 102 ntBASIC5.79□□□□□ -1.48
CCNA1P78396 MIR298-201ENST00000401212 88 ntBASIC5.79□□□□□ -1.48
CCNA1P78396 SNORA81-201ENST00000408493 178 ntBASIC5.79□□□□□ -1.48
CCNA1P78396 AC002524.1-201ENST00000411687 547 ntBASIC5.79□□□□□ -1.48
CCNA1P78396 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.79□□□□□ -1.48
CCNA1P78396 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.79□□□□□ -1.48
CCNA1P78396 AC068287.1-201ENST00000430283 295 ntBASIC5.79□□□□□ -1.48
CCNA1P78396 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCNA1P78396 AC091390.1-201ENST00000433904 331 ntBASIC5.79□□□□□ -1.48
CCNA1P78396 AC016772.1-201ENST00000444170 1261 ntBASIC5.79□□□□□ -1.48
CCNA1P78396 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.79□□□□□ -1.48
CCNA1P78396 RN7SL354P-201ENST00000469282 294 ntBASIC5.79□□□□□ -1.48
CCNA1P78396 AC011005.3-201ENST00000491624 395 ntBASIC5.79□□□□□ -1.48
CCNA1P78396 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.79□□□□□ -1.48
CCNA1P78396 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.79□□□□□ -1.48
CCNA1P78396 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.79□□□□□ -1.48
CCNA1P78396 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.79□□□□□ -1.48
CCNA1P78396 C1GALT1P3-201ENST00000522049 819 ntBASIC5.79□□□□□ -1.48
CCNA1P78396 AP000859.1-201ENST00000525536 307 ntBASIC5.79□□□□□ -1.48
CCNA1P78396 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.79□□□□□ -1.48
CCNA1P78396 BNIP3P35-201ENST00000604530 490 ntBASIC5.79□□□□□ -1.48
CCNA1P78396 AP005432.2-201ENST00000608162 586 ntBASIC5.79□□□□□ -1.48
CCNA1P78396 AC016252.1-201ENST00000609721 474 ntBASIC5.79□□□□□ -1.48
CCNA1P78396 AL356608.1-201ENST00000610034 820 ntBASIC5.79□□□□□ -1.48
CCNA1P78396 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.79□□□□□ -1.48
CCNA1P78396 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.79□□□□□ -1.48
CCNA1P78396 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCNA1P78396 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.79□□□□□ -1.48
CCNA1P78396 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCNA1P78396 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CCNA1P78396 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.79□□□□□ -1.48
CCNA1P78396 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.79□□□□□ -1.48
CCNA1P78396 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCNA1P78396 AL513548.1-201ENST00000562904 1724 ntBASIC5.79□□□□□ -1.48
CCNA1P78396 MFSD8-216ENST00000641147 4009 ntBASIC5.79□□□□□ -1.48
CCNA1P78396 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.79□□□□□ -1.48
CCNA1P78396 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCNA1P78396 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCNA1P78396 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCNA1P78396 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CCNA1P78396 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.79□□□□□ -1.48
CCNA1P78396 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCNA1P78396 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCNA1P78396 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCNA1P78396 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.78□□□□□ -1.48
CCNA1P78396 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCNA1P78396 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.78□□□□□ -1.48
CCNA1P78396 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCNA1P78396 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCNA1P78396 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCNA1P78396 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCNA1P78396 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CCNA1P78396 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCNA1P78396 RN7SKP100-201ENST00000411258 284 ntBASIC5.78□□□□□ -1.48
CCNA1P78396 SLC25A18P1-201ENST00000449385 454 ntBASIC5.78□□□□□ -1.48
CCNA1P78396 RN7SL385P-201ENST00000468873 276 ntBASIC5.78□□□□□ -1.48
CCNA1P78396 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCNA1P78396 MRPS33P2-201ENST00000507850 322 ntBASIC5.78□□□□□ -1.48
CCNA1P78396 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.78□□□□□ -1.48
CCNA1P78396 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.78□□□□□ -1.48
CCNA1P78396 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.78□□□□□ -1.48
CCNA1P78396 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CCNA1P78396 EIF1P5-201ENST00000585002 234 ntBASIC5.78□□□□□ -1.48
CCNA1P78396 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.78□□□□□ -1.48
CCNA1P78396 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCNA1P78396 AC068790.4-201ENST00000602474 263 ntBASIC5.78□□□□□ -1.48
CCNA1P78396 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.78□□□□□ -1.48
CCNA1P78396 SAMMSON-226ENST00000642089 1582 ntBASIC5.78□□□□□ -1.48
CCNA1P78396 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
CCNA1P78396 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms