Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TRIM77BP-201ENST00000524985 1119 ntBASIC5.09□□□□□ -1.59
CDH12P55289 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.09□□□□□ -1.59
CDH12P55289 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH12P55289 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.09□□□□□ -1.59
CDH12P55289 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.09□□□□□ -1.59
CDH12P55289 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH12P55289 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH12P55289 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.09□□□□□ -1.59
CDH12P55289 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH12P55289 AC068020.1-201ENST00000594215 661 ntBASIC5.09□□□□□ -1.59
CDH12P55289 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.09□□□□□ -1.59
CDH12P55289 AC130352.1-201ENST00000602979 661 ntBASIC5.09□□□□□ -1.59
CDH12P55289 AC098935.2-201ENST00000604222 466 ntBASIC5.09□□□□□ -1.59
CDH12P55289 SUMO2P14-201ENST00000604488 293 ntBASIC5.09□□□□□ -1.59
CDH12P55289 RMST_10.1-201ENST00000616309 154 ntBASIC5.09□□□□□ -1.59
CDH12P55289 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH12P55289 AL390318.1-201ENST00000624564 687 ntBASIC5.09□□□□□ -1.59
CDH12P55289 AC103703.1-201ENST00000634783 663 ntBASIC5.09□□□□□ -1.59
CDH12P55289 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDH12P55289 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH12P55289 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.09□□□□□ -1.59
CDH12P55289 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH12P55289 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDH12P55289 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CDH12P55289 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CDH12P55289 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CDH12P55289 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.09□□□□□ -1.6
CDH12P55289 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.09□□□□□ -1.6
CDH12P55289 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
CDH12P55289 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
CDH12P55289 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CDH12P55289 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH12P55289 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH12P55289 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CDH12P55289 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH12P55289 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH12P55289 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH12P55289 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH12P55289 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH12P55289 RN7SKP187-201ENST00000365536 330 ntBASIC5.08□□□□□ -1.6
CDH12P55289 ANAPC10P1-201ENST00000395991 556 ntBASIC5.08□□□□□ -1.6
CDH12P55289 AL034403.1-201ENST00000399414 885 ntBASIC5.08□□□□□ -1.6
CDH12P55289 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH12P55289 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH12P55289 AC115285.1-201ENST00000424879 736 ntBASIC5.08□□□□□ -1.6
CDH12P55289 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH12P55289 AC092447.3-201ENST00000426027 686 ntBASIC5.08□□□□□ -1.6
CDH12P55289 DEFB130D-201ENST00000426866 237 ntBASIC5.08□□□□□ -1.6
CDH12P55289 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH12P55289 ARF4P4-201ENST00000439608 520 ntBASIC5.08□□□□□ -1.6
CDH12P55289 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH12P55289 CYCSP51-201ENST00000443545 318 ntBASIC5.08□□□□□ -1.6
CDH12P55289 ELOCP13-201ENST00000443934 329 ntBASIC5.08□□□□□ -1.6
CDH12P55289 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH12P55289 RPL6P5-201ENST00000445678 828 ntBASIC5.08□□□□□ -1.6
CDH12P55289 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CDH12P55289 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH12P55289 OR52E3P-201ENST00000452083 936 ntBASIC5.08□□□□□ -1.6
CDH12P55289 RN7SL168P-201ENST00000463821 279 ntBASIC5.08□□□□□ -1.6
CDH12P55289 AC087672.1-201ENST00000479876 766 ntBASIC5.08□□□□□ -1.6
CDH12P55289 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH12P55289 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH12P55289 HMGN1P9-201ENST00000515212 298 ntBASIC5.08□□□□□ -1.6
CDH12P55289 MTCYBP19-201ENST00000517463 1124 ntBASIC5.08□□□□□ -1.6
CDH12P55289 CDC42P3-201ENST00000518493 633 ntBASIC5.08□□□□□ -1.6
CDH12P55289 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH12P55289 AC138832.1-201ENST00000522871 556 ntBASIC5.08□□□□□ -1.6
CDH12P55289 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH12P55289 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH12P55289 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.08□□□□□ -1.6
CDH12P55289 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH12P55289 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH12P55289 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH12P55289 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH12P55289 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH12P55289 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
CDH12P55289 AC010735.1-201ENST00000567305 1026 ntBASIC5.08□□□□□ -1.6
CDH12P55289 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.08□□□□□ -1.6
CDH12P55289 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH12P55289 AC084373.1-201ENST00000603311 235 ntBASIC5.08□□□□□ -1.6
CDH12P55289 RPP40P2-201ENST00000603596 712 ntBASIC5.08□□□□□ -1.6
CDH12P55289 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH12P55289 AC087683.2-201ENST00000611384 326 ntBASIC5.08□□□□□ -1.6
CDH12P55289 AL669942.2-201ENST00000620352 697 ntBASIC5.08□□□□□ -1.6
CDH12P55289 AC087565.3-203ENST00000641018 837 ntBASIC5.08□□□□□ -1.6
CDH12P55289 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CDH12P55289 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CDH12P55289 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.08□□□□□ -1.6
CDH12P55289 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CDH12P55289 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH12P55289 AC015689.2-201ENST00000528172 1738 ntBASIC5.08□□□□□ -1.6
CDH12P55289 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH12P55289 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH12P55289 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH12P55289 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH12P55289 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CDH12P55289 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CDH12P55289 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CDH12P55289 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH12P55289 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms