Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.97□□□□□ -1.45
NUP98P52948 RN7SL652P-201ENST00000577769 300 ntBASIC5.97□□□□□ -1.45
NUP98P52948 AC073091.2-201ENST00000603205 907 ntBASIC5.97□□□□□ -1.45
NUP98P52948 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.97□□□□□ -1.45
NUP98P52948 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NUP98P52948 AL360270.2-201ENST00000562952 5985 ntBASIC5.97□□□□□ -1.45
NUP98P52948 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NUP98P52948 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
NUP98P52948 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
NUP98P52948 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.96□□□□□ -1.45
NUP98P52948 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NUP98P52948 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NUP98P52948 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.96□□□□□ -1.46
NUP98P52948 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NUP98P52948 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NUP98P52948 AC140479.3-201ENST00000418944 1126 ntBASIC5.96□□□□□ -1.46
NUP98P52948 AC068587.1-201ENST00000483613 781 ntBASIC5.96□□□□□ -1.46
NUP98P52948 RPL26P30-202ENST00000602923 645 ntBASIC5.96□□□□□ -1.46
NUP98P52948 AC011815.3-201ENST00000624194 473 ntBASIC5.96□□□□□ -1.46
NUP98P52948 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.96□□□□□ -1.46
NUP98P52948 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
NUP98P52948 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
NUP98P52948 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NUP98P52948 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NUP98P52948 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.96□□□□□ -1.46
NUP98P52948 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NUP98P52948 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NUP98P52948 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.95□□□□□ -1.46
NUP98P52948 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NUP98P52948 SAMM50P1-201ENST00000455403 1399 ntBASIC5.95□□□□□ -1.46
NUP98P52948 TRIM51GP-201ENST00000534741 1350 ntBASIC5.95□□□□□ -1.46
NUP98P52948 AL591135.1-201ENST00000401578 5914 ntBASIC5.95□□□□□ -1.46
NUP98P52948 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NUP98P52948 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.95□□□□□ -1.46
NUP98P52948 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
NUP98P52948 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.95□□□□□ -1.46
NUP98P52948 AC007064.3-201ENST00000422608 359 ntBASIC5.95□□□□□ -1.46
NUP98P52948 RPEP3-201ENST00000425462 676 ntBASIC5.95□□□□□ -1.46
NUP98P52948 AC023141.6-201ENST00000429418 337 ntBASIC5.95□□□□□ -1.46
NUP98P52948 AL451139.1-201ENST00000434718 346 ntBASIC5.95□□□□□ -1.46
NUP98P52948 EIF2S2P2-201ENST00000447161 982 ntBASIC5.95□□□□□ -1.46
NUP98P52948 PPIAP21-201ENST00000464473 501 ntBASIC5.95□□□□□ -1.46
NUP98P52948 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.95□□□□□ -1.46
NUP98P52948 RN7SKP21-201ENST00000516503 220 ntBASIC5.95□□□□□ -1.46
NUP98P52948 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.95□□□□□ -1.46
NUP98P52948 AP005119.2-201ENST00000579735 1105 ntBASIC5.95□□□□□ -1.46
NUP98P52948 MIR4715-201ENST00000584117 79 ntBASIC5.95□□□□□ -1.46
NUP98P52948 AL121932.1-201ENST00000605542 214 ntBASIC5.95□□□□□ -1.46
NUP98P52948 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NUP98P52948 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
NUP98P52948 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
NUP98P52948 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
NUP98P52948 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.95□□□□□ -1.46
NUP98P52948 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
NUP98P52948 AC006065.1-201ENST00000422539 802 ntBASIC5.95□□□□□ -1.46
NUP98P52948 AC004975.1-201ENST00000428733 208 ntBASIC5.95□□□□□ -1.46
NUP98P52948 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.95□□□□□ -1.46
NUP98P52948 AL161747.1-201ENST00000480068 358 ntBASIC5.95□□□□□ -1.46
NUP98P52948 RPL36AP41-201ENST00000493820 306 ntBASIC5.95□□□□□ -1.46
NUP98P52948 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
NUP98P52948 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.95□□□□□ -1.46
NUP98P52948 AC136624.4-201ENST00000573044 370 ntBASIC5.95□□□□□ -1.46
NUP98P52948 MIR4675-201ENST00000577898 77 ntBASIC5.95□□□□□ -1.46
NUP98P52948 SNORA74C-1-201ENST00000580726 201 ntBASIC5.95□□□□□ -1.46
NUP98P52948 AC100847.1-201ENST00000611316 481 ntBASIC5.95□□□□□ -1.46
NUP98P52948 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
NUP98P52948 AC135352.1-201ENST00000506173 1418 ntBASIC5.94□□□□□ -1.46
NUP98P52948 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NUP98P52948 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.94□□□□□ -1.46
NUP98P52948 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.94□□□□□ -1.46
NUP98P52948 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
NUP98P52948 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.94□□□□□ -1.46
NUP98P52948 AL121950.1-201ENST00000624993 2077 ntBASIC5.94□□□□□ -1.46
NUP98P52948 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
NUP98P52948 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUP98P52948 SNORA71.2-201ENST00000364941 134 ntBASIC5.94□□□□□ -1.46
NUP98P52948 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUP98P52948 MIR659-201ENST00000384963 97 ntBASIC5.94□□□□□ -1.46
NUP98P52948 OR1F12-201ENST00000402365 945 ntBASIC5.94□□□□□ -1.46
NUP98P52948 AL591848.1-201ENST00000413092 322 ntBASIC5.94□□□□□ -1.46
NUP98P52948 UQCRBP1-201ENST00000421129 336 ntBASIC5.94□□□□□ -1.46
NUP98P52948 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.94□□□□□ -1.46
NUP98P52948 RPL12P28-201ENST00000430852 489 ntBASIC5.94□□□□□ -1.46
NUP98P52948 AL136455.1-201ENST00000441083 1240 ntBASIC5.94□□□□□ -1.46
NUP98P52948 CYCSP24-201ENST00000445119 316 ntBASIC5.94□□□□□ -1.46
NUP98P52948 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.94□□□□□ -1.46
NUP98P52948 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUP98P52948 IGBP1P5-201ENST00000507524 1000 ntBASIC5.94□□□□□ -1.46
NUP98P52948 AC093840.1-201ENST00000511599 336 ntBASIC5.94□□□□□ -1.46
NUP98P52948 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.94□□□□□ -1.46
NUP98P52948 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.94□□□□□ -1.46
NUP98P52948 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
NUP98P52948 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
NUP98P52948 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.94□□□□□ -1.46
NUP98P52948 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.94□□□□□ -1.46
NUP98P52948 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.94□□□□□ -1.46
NUP98P52948 AC125494.2-201ENST00000602431 657 ntBASIC5.94□□□□□ -1.46
NUP98P52948 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.94□□□□□ -1.46
NUP98P52948 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUP98P52948 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms