Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 RNA5SP315-201ENST00000516340 116 ntBASIC8.54□□□□□ -1.04
SMARCA4P51532 RNA5SP312-201ENST00000517068 116 ntBASIC8.54□□□□□ -1.04
SMARCA4P51532 TRAV8-5-201ENST00000537369 341 ntBASIC8.54□□□□□ -1.04
SMARCA4P51532 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC8.54□□□□□ -1.04
SMARCA4P51532 AC093249.4-201ENST00000564755 259 ntBASIC8.54□□□□□ -1.04
SMARCA4P51532 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC8.54□□□□□ -1.04
SMARCA4P51532 ZYXP1-201ENST00000617638 118 ntBASIC8.54□□□□□ -1.04
SMARCA4P51532 AL035461.2-201ENST00000619201 524 ntBASIC8.54□□□□□ -1.04
SMARCA4P51532 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
SMARCA4P51532 NSF-206ENST00000575068 2667 ntTSL 2 BASIC8.53□□□□□ -1.04
SMARCA4P51532 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SMARCA4P51532 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SMARCA4P51532 SNORA70C-201ENST00000384538 135 ntBASIC8.53□□□□□ -1.04
SMARCA4P51532 ARL4AP5-201ENST00000404372 599 ntBASIC8.53□□□□□ -1.04
SMARCA4P51532 RN7SKP17-201ENST00000411242 351 ntBASIC8.53□□□□□ -1.04
SMARCA4P51532 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SMARCA4P51532 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC8.53□□□□□ -1.04
SMARCA4P51532 RPL21P126-201ENST00000470049 478 ntBASIC8.53□□□□□ -1.04
SMARCA4P51532 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC8.53□□□□□ -1.04
SMARCA4P51532 CARD16-203ENST00000525374 503 ntTSL 3 BASIC8.53□□□□□ -1.04
SMARCA4P51532 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC8.53□□□□□ -1.04
SMARCA4P51532 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
SMARCA4P51532 ARL6IP1P1-201ENST00000545836 610 ntBASIC8.53□□□□□ -1.04
SMARCA4P51532 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC8.53□□□□□ -1.04
SMARCA4P51532 MIR4420-201ENST00000583944 77 ntBASIC8.53□□□□□ -1.04
SMARCA4P51532 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC8.53□□□□□ -1.04
SMARCA4P51532 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SMARCA4P51532 AC243960.7-201ENST00000623532 707 ntBASIC8.53□□□□□ -1.04
SMARCA4P51532 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SMARCA4P51532 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SMARCA4P51532 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SMARCA4P51532 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
SMARCA4P51532 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
SMARCA4P51532 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC8.52□□□□□ -1.04
SMARCA4P51532 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
SMARCA4P51532 ATP5F1P2-201ENST00000398143 760 ntBASIC8.52□□□□□ -1.05
SMARCA4P51532 CASKP1-201ENST00000412870 582 ntBASIC8.52□□□□□ -1.05
SMARCA4P51532 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC8.52□□□□□ -1.05
SMARCA4P51532 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC8.52□□□□□ -1.05
SMARCA4P51532 AC114755.5-201ENST00000447760 831 ntBASIC8.52□□□□□ -1.05
SMARCA4P51532 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC8.52□□□□□ -1.05
SMARCA4P51532 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC8.52□□□□□ -1.05
SMARCA4P51532 RPSAP51-201ENST00000497462 645 ntBASIC8.52□□□□□ -1.05
SMARCA4P51532 FCF1-203ENST00000553615 954 ntTSL 3 BASIC8.52□□□□□ -1.05
SMARCA4P51532 PRPF19P1-201ENST00000584766 898 ntBASIC8.52□□□□□ -1.05
SMARCA4P51532 SNX18P1Y-201ENST00000616231 511 ntBASIC8.52□□□□□ -1.05
SMARCA4P51532 UGT2B26P-201ENST00000508672 1613 ntBASIC8.52□□□□□ -1.05
SMARCA4P51532 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SMARCA4P51532 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
SMARCA4P51532 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SMARCA4P51532 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
SMARCA4P51532 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
SMARCA4P51532 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SMARCA4P51532 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SMARCA4P51532 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
SMARCA4P51532 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SMARCA4P51532 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SMARCA4P51532 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
SMARCA4P51532 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC8.51□□□□□ -1.05
SMARCA4P51532 H3F3BP1-201ENST00000440551 403 ntBASIC8.51□□□□□ -1.05
SMARCA4P51532 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC8.51□□□□□ -1.05
SMARCA4P51532 PRPF38AP1-201ENST00000451976 933 ntBASIC8.51□□□□□ -1.05
SMARCA4P51532 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC8.51□□□□□ -1.05
SMARCA4P51532 AC136777.2-201ENST00000522979 358 ntBASIC8.51□□□□□ -1.05
SMARCA4P51532 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC8.51□□□□□ -1.05
SMARCA4P51532 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC8.51□□□□□ -1.05
SMARCA4P51532 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC8.51□□□□□ -1.05
SMARCA4P51532 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC8.51□□□□□ -1.05
SMARCA4P51532 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
SMARCA4P51532 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SMARCA4P51532 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SMARCA4P51532 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
SMARCA4P51532 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SMARCA4P51532 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC8.51□□□□□ -1.05
SMARCA4P51532 BMS1P19-201ENST00000433925 393 ntBASIC8.51□□□□□ -1.05
SMARCA4P51532 FTH1P16-201ENST00000435241 552 ntBASIC8.51□□□□□ -1.05
SMARCA4P51532 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC8.51□□□□□ -1.05
SMARCA4P51532 AC106806.2-201ENST00000509365 500 ntBASIC8.51□□□□□ -1.05
SMARCA4P51532 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC8.51□□□□□ -1.05
SMARCA4P51532 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC8.51□□□□□ -1.05
SMARCA4P51532 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC8.51□□□□□ -1.05
SMARCA4P51532 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC8.51□□□□□ -1.05
SMARCA4P51532 AC040958.1-201ENST00000561102 201 ntBASIC8.51□□□□□ -1.05
SMARCA4P51532 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC8.51□□□□□ -1.05
SMARCA4P51532 RN7SL652P-201ENST00000577769 300 ntBASIC8.51□□□□□ -1.05
SMARCA4P51532 MIR492-201ENST00000638676 116 ntBASIC8.51□□□□□ -1.05
SMARCA4P51532 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC8.51□□□□□ -1.05
SMARCA4P51532 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SMARCA4P51532 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SMARCA4P51532 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC8.5□□□□□ -1.05
SMARCA4P51532 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
SMARCA4P51532 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC8.5□□□□□ -1.05
SMARCA4P51532 AP005432.1-201ENST00000580891 3485 ntBASIC8.5□□□□□ -1.05
SMARCA4P51532 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
SMARCA4P51532 AC021146.4-201ENST00000309229 279 ntBASIC8.5□□□□□ -1.05
SMARCA4P51532 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC8.5□□□□□ -1.05
SMARCA4P51532 QRSL1P2-201ENST00000418582 964 ntBASIC8.5□□□□□ -1.05
SMARCA4P51532 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC8.5□□□□□ -1.05
SMARCA4P51532 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC8.5□□□□□ -1.05
SMARCA4P51532 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC8.5□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms