Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL12P48061 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.98□□□□□ -1.61
CXCL12P48061 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL12P48061 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL12P48061 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL12P48061 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL12P48061 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
CXCL12P48061 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CXCL12P48061 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
CXCL12P48061 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.97□□□□□ -1.61
CXCL12P48061 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL12P48061 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL12P48061 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL12P48061 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CXCL12P48061 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL12P48061 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
CXCL12P48061 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL12P48061 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.97□□□□□ -1.61
CXCL12P48061 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC4.97□□□□□ -1.61
CXCL12P48061 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL12P48061 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CXCL12P48061 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC4.97□□□□□ -1.61
CXCL12P48061 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL12P48061 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL12P48061 NCLP2-201ENST00000416078 1462 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL12P48061 FAM3C2-201ENST00000312214 681 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL12P48061 RNU4-39P-201ENST00000362455 127 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 Y_RNA.126-201ENST00000363382 111 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CXCL12P48061 ATP5HP3-201ENST00000396994 486 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 AL049697.2-201ENST00000403708 294 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.97□□□□□ -1.61
CXCL12P48061 DPPA2P2-201ENST00000418220 897 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.97□□□□□ -1.61
CXCL12P48061 MRPS21P2-201ENST00000424704 264 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 AC234779.1-201ENST00000425910 285 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 AL590399.2-201ENST00000427536 309 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.97□□□□□ -1.61
CXCL12P48061 AC004975.1-201ENST00000428733 208 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 RPL12P28-201ENST00000430852 489 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.97□□□□□ -1.61
CXCL12P48061 AC016831.4-201ENST00000438302 307 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 AL359265.1-201ENST00000440296 795 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 RPS29P9-201ENST00000440360 171 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.97□□□□□ -1.61
CXCL12P48061 AC004980.3-201ENST00000447046 365 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 CEACAMP6-201ENST00000452007 574 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 RPS5P7-201ENST00000456664 608 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 AC091180.1-201ENST00000462104 372 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.97□□□□□ -1.61
CXCL12P48061 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.97□□□□□ -1.61
CXCL12P48061 AC116562.1-201ENST00000485355 781 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 RN7SL814P-201ENST00000487715 300 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 AC013356.1-201ENST00000489027 564 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 AC083829.1-201ENST00000503756 657 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 AC093840.1-201ENST00000511599 336 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 AC098976.1-201ENST00000513014 541 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 RN7SKP21-201ENST00000516503 220 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 AC134698.5-201ENST00000519444 336 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 AC012339.2-201ENST00000523996 453 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.97□□□□□ -1.61
CXCL12P48061 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.97□□□□□ -1.61
CXCL12P48061 AC019322.1-201ENST00000571869 389 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.97□□□□□ -1.61
CXCL12P48061 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.97□□□□□ -1.61
CXCL12P48061 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.97□□□□□ -1.61
CXCL12P48061 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CXCL12P48061 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC4.97□□□□□ -1.61
CXCL12P48061 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL12P48061 AC019206.1-201ENST00000621938 425 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL12P48061 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.97□□□□□ -1.61
CXCL12P48061 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.97□□□□□ -1.61
CXCL12P48061 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.97□□□□□ -1.61
CXCL12P48061 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
CXCL12P48061 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
CXCL12P48061 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL12P48061 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CXCL12P48061 AC108751.5-201ENST00000492880 1336 ntBASIC4.97□□□□□ -1.61
CXCL12P48061 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CXCL12P48061 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.96□□□□□ -1.61
CXCL12P48061 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
CXCL12P48061 ECM1P2-201ENST00000503354 1577 ntBASIC4.96□□□□□ -1.62
CXCL12P48061 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CXCL12P48061 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CXCL12P48061 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.96□□□□□ -1.62
CXCL12P48061 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CXCL12P48061 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.96□□□□□ -1.62
CXCL12P48061 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CXCL12P48061 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CXCL12P48061 AL390316.1-201ENST00000406279 553 ntBASIC4.96□□□□□ -1.62
CXCL12P48061 RSU1P3-201ENST00000412878 835 ntBASIC4.96□□□□□ -1.62
CXCL12P48061 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.96□□□□□ -1.62
CXCL12P48061 AC239367.2-201ENST00000447309 705 ntBASIC4.96□□□□□ -1.62
CXCL12P48061 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CXCL12P48061 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.96□□□□□ -1.62
CXCL12P48061 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.96□□□□□ -1.62
CXCL12P48061 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms