Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
BRCC3P46736 AC099654.2-201ENST00000433031 1980 ntBASIC5.33□□□□□ -1.56
BRCC3P46736 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRCC3P46736 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.33□□□□□ -1.56
BRCC3P46736 AC005261.6-201ENST00000623072 1387 ntBASIC5.33□□□□□ -1.56
BRCC3P46736 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
BRCC3P46736 RNA5SP443-201ENST00000363083 132 ntBASIC5.33□□□□□ -1.56
BRCC3P46736 RNA5SP187-201ENST00000384400 119 ntBASIC5.33□□□□□ -1.56
BRCC3P46736 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.33□□□□□ -1.56
BRCC3P46736 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.33□□□□□ -1.56
BRCC3P46736 AC013268.2-201ENST00000420753 337 ntBASIC5.33□□□□□ -1.56
BRCC3P46736 AC004074.1-201ENST00000421810 1063 ntBASIC5.33□□□□□ -1.56
BRCC3P46736 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.33□□□□□ -1.56
BRCC3P46736 COX6CP13-201ENST00000428703 226 ntBASIC5.33□□□□□ -1.56
BRCC3P46736 TXNP5-201ENST00000441043 315 ntBASIC5.33□□□□□ -1.56
BRCC3P46736 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.33□□□□□ -1.56
BRCC3P46736 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.33□□□□□ -1.56
BRCC3P46736 HMGB1P4-201ENST00000455362 567 ntBASIC5.33□□□□□ -1.56
BRCC3P46736 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.33□□□□□ -1.56
BRCC3P46736 MORF4L2P1-201ENST00000503761 858 ntBASIC5.33□□□□□ -1.56
BRCC3P46736 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.33□□□□□ -1.56
BRCC3P46736 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.33□□□□□ -1.56
BRCC3P46736 AC137768.1-201ENST00000549998 553 ntBASIC5.33□□□□□ -1.56
BRCC3P46736 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.33□□□□□ -1.56
BRCC3P46736 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.33□□□□□ -1.56
BRCC3P46736 AL390726.5-202ENST00000564800 256 ntBASIC5.33□□□□□ -1.56
BRCC3P46736 AC104785.1-201ENST00000603220 588 ntBASIC5.33□□□□□ -1.56
BRCC3P46736 AC020910.3-201ENST00000603701 874 ntBASIC5.33□□□□□ -1.56
BRCC3P46736 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.33□□□□□ -1.56
BRCC3P46736 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.33□□□□□ -1.56
BRCC3P46736 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.33□□□□□ -1.56
BRCC3P46736 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.33□□□□□ -1.56
BRCC3P46736 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.33□□□□□ -1.56
BRCC3P46736 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRCC3P46736 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRCC3P46736 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRCC3P46736 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRCC3P46736 SMG1P7-201ENST00000565246 2704 ntBASIC5.32□□□□□ -1.56
BRCC3P46736 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.32□□□□□ -1.56
BRCC3P46736 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
BRCC3P46736 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRCC3P46736 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRCC3P46736 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRCC3P46736 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRCC3P46736 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
BRCC3P46736 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.32□□□□□ -1.56
BRCC3P46736 RNVU1-6-201ENST00000364688 164 ntBASIC5.32□□□□□ -1.56
BRCC3P46736 HMGB3P7-201ENST00000400214 611 ntBASIC5.32□□□□□ -1.56
BRCC3P46736 U3.32-201ENST00000408116 212 ntBASIC5.32□□□□□ -1.56
BRCC3P46736 GTF2IP5-201ENST00000414608 731 ntBASIC5.32□□□□□ -1.56
BRCC3P46736 RPS29P33-201ENST00000456717 146 ntBASIC5.32□□□□□ -1.56
BRCC3P46736 AC008897.1-201ENST00000494006 347 ntBASIC5.32□□□□□ -1.56
BRCC3P46736 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.32□□□□□ -1.56
BRCC3P46736 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.32□□□□□ -1.56
BRCC3P46736 BNIP3P1-201ENST00000547295 580 ntBASIC5.32□□□□□ -1.56
BRCC3P46736 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.32□□□□□ -1.56
BRCC3P46736 UBE2FP2-201ENST00000566646 462 ntBASIC5.32□□□□□ -1.56
BRCC3P46736 AC027216.1-201ENST00000577726 685 ntBASIC5.32□□□□□ -1.56
BRCC3P46736 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.32□□□□□ -1.56
BRCC3P46736 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
BRCC3P46736 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
BRCC3P46736 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.32□□□□□ -1.56
BRCC3P46736 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.32□□□□□ -1.56
BRCC3P46736 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.32□□□□□ -1.56
BRCC3P46736 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.32□□□□□ -1.56
BRCC3P46736 AC010503.3-201ENST00000594355 540 ntBASIC5.32□□□□□ -1.56
BRCC3P46736 AC011453.2-201ENST00000603737 729 ntBASIC5.32□□□□□ -1.56
BRCC3P46736 AP001521.2-201ENST00000608772 546 ntBASIC5.32□□□□□ -1.56
BRCC3P46736 uc_338.18-201ENST00000615451 175 ntBASIC5.32□□□□□ -1.56
BRCC3P46736 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.32□□□□□ -1.56
BRCC3P46736 AC012078.1-201ENST00000405035 1646 ntBASIC5.32□□□□□ -1.56
BRCC3P46736 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRCC3P46736 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRCC3P46736 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.32□□□□□ -1.56
BRCC3P46736 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
BRCC3P46736 AC012618.3-205ENST00000637896 1496 ntBASIC5.32□□□□□ -1.56
BRCC3P46736 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
BRCC3P46736 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.32□□□□□ -1.56
BRCC3P46736 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.32□□□□□ -1.56
BRCC3P46736 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
BRCC3P46736 TCP11X1-202ENST00000622971 1372 ntBASIC5.31□□□□□ -1.56
BRCC3P46736 CASC19-255ENST00000641733 1385 ntBASIC5.31□□□□□ -1.56
BRCC3P46736 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.31□□□□□ -1.56
BRCC3P46736 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.31□□□□□ -1.56
BRCC3P46736 AC233968.1-201ENST00000611212 1300 ntBASIC5.31□□□□□ -1.56
BRCC3P46736 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
BRCC3P46736 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
BRCC3P46736 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
BRCC3P46736 RPL10P10-201ENST00000403509 664 ntBASIC5.31□□□□□ -1.56
BRCC3P46736 AL136116.2-201ENST00000404020 785 ntBASIC5.31□□□□□ -1.56
BRCC3P46736 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.31□□□□□ -1.56
BRCC3P46736 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.31□□□□□ -1.56
BRCC3P46736 HMGN2P27-201ENST00000427352 270 ntBASIC5.31□□□□□ -1.56
BRCC3P46736 AC046176.1-201ENST00000435260 1170 ntBASIC5.31□□□□□ -1.56
BRCC3P46736 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.31□□□□□ -1.56
BRCC3P46736 AL450023.3-201ENST00000440592 271 ntBASIC5.31□□□□□ -1.56
BRCC3P46736 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
BRCC3P46736 RPS29P22-201ENST00000472363 168 ntBASIC5.31□□□□□ -1.56
BRCC3P46736 AC135999.1-201ENST00000478962 479 ntBASIC5.31□□□□□ -1.56
BRCC3P46736 AC091917.2-201ENST00000505002 744 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms