Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC12P31275 CYCSP45-201ENST00000402289 315 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC12P31275 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC12P31275 MTND1P23-201ENST00000416931 372 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC12P31275 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC12P31275 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC12P31275 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC12P31275 AL389925.1-201ENST00000432257 728 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC12P31275 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC12P31275 TXNP5-201ENST00000441043 315 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 RPS10P18-201ENST00000442662 495 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 AC007383.1-201ENST00000445875 636 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 REG1CP-206ENST00000447469 496 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC12P31275 AL133351.3-201ENST00000454998 193 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC12P31275 AC096741.1-201ENST00000472250 846 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 RN7SL379P-201ENST00000479912 293 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 RN7SL382P-201ENST00000482631 282 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 RPL9P33-201ENST00000484311 566 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 RPL7P41-201ENST00000485823 957 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 AC015524.1-201ENST00000491585 472 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 RPS10P20-201ENST00000494130 463 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC12P31275 AC006499.5-201ENST00000505037 514 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC12P31275 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC12P31275 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC12P31275 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC12P31275 RNU6-405P-201ENST00000516637 110 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC12P31275 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC6.03□□□□□ -1.44
HOXC12P31275 AP003080.1-202ENST00000526526 915 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 AP003392.2-201ENST00000527269 208 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 AP001189.2-201ENST00000527320 189 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.03□□□□□ -1.44
HOXC12P31275 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC12P31275 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC12P31275 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC12P31275 MT1CP-201ENST00000567054 174 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 AL390816.3-201ENST00000604527 1066 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 AL451049.1-201ENST00000608672 497 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 AC138749.5-201ENST00000611461 208 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 AC005332.6-201ENST00000613178 446 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC12P31275 AC025048.6-202ENST00000627667 438 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC12P31275 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC12P31275 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC12P31275 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC12P31275 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC12P31275 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC12P31275 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HOXC12P31275 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC12P31275 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC12P31275 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC12P31275 AC125336.1-201ENST00000508893 2827 ntBASIC6.03□□□□□ -1.44
HOXC12P31275 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC12P31275 AC217777.1-201ENST00000570034 1471 ntBASIC6.02□□□□□ -1.44
HOXC12P31275 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC12P31275 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC12P31275 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
HOXC12P31275 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
HOXC12P31275 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXC12P31275 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXC12P31275 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC12P31275 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC12P31275 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC12P31275 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC12P31275 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC12P31275 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC12P31275 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC12P31275 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC12P31275 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC12P31275 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC12P31275 Y_RNA.41-201ENST00000362646 102 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 RNU1-5P-201ENST00000362684 144 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 RNU1-65P-201ENST00000363919 148 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 RNU6-660P-201ENST00000364566 109 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HOXC12P31275 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.02□□□□□ -1.45
HOXC12P31275 RNA5SP122-201ENST00000384457 108 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HOXC12P31275 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HOXC12P31275 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HOXC12P31275 AL590290.1-201ENST00000405336 380 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 CYCSP17-201ENST00000407870 315 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 MIR1204-201ENST00000408388 67 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 RPL23AP39-201ENST00000415533 405 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 AC004448.2-201ENST00000422360 586 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 AC000089.1-201ENST00000424559 801 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.02□□□□□ -1.45
HOXC12P31275 NPM1P22-201ENST00000427761 952 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC6.02□□□□□ -1.45
HOXC12P31275 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms