Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC8P31273 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC8P31273 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
HOXC8P31273 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
HOXC8P31273 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC8P31273 Z97832.1-201ENST00000402490 328 ntBASIC5.63□□□□□ -1.51
HOXC8P31273 RPL10P10-201ENST00000403509 664 ntBASIC5.63□□□□□ -1.51
HOXC8P31273 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.63□□□□□ -1.51
HOXC8P31273 AL133482.1-201ENST00000415988 498 ntBASIC5.63□□□□□ -1.51
HOXC8P31273 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC8P31273 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXC8P31273 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC8P31273 IGHV5-78-201ENST00000450948 295 ntBASIC5.63□□□□□ -1.51
HOXC8P31273 SEPT7P3-201ENST00000455017 621 ntBASIC5.63□□□□□ -1.51
HOXC8P31273 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXC8P31273 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXC8P31273 IGKV1-32-201ENST00000519290 311 ntBASIC5.63□□□□□ -1.51
HOXC8P31273 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXC8P31273 AL358913.1-201ENST00000554342 121 ntBASIC5.63□□□□□ -1.51
HOXC8P31273 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXC8P31273 UBE2FP2-201ENST00000566646 462 ntBASIC5.63□□□□□ -1.51
HOXC8P31273 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXC8P31273 AL136370.1-201ENST00000608166 691 ntBASIC5.63□□□□□ -1.51
HOXC8P31273 OR51C1P-201ENST00000608504 942 ntBASIC5.63□□□□□ -1.51
HOXC8P31273 AC016911.1-201ENST00000613297 452 ntBASIC5.63□□□□□ -1.51
HOXC8P31273 AL352984.2-202ENST00000613699 155 ntBASIC5.63□□□□□ -1.51
HOXC8P31273 MIR6133-201ENST00000617057 108 ntBASIC5.63□□□□□ -1.51
HOXC8P31273 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXC8P31273 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC8P31273 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC8P31273 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC8P31273 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC8P31273 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXC8P31273 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXC8P31273 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.63□□□□□ -1.51
HOXC8P31273 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC8P31273 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXC8P31273 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXC8P31273 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC8P31273 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
HOXC8P31273 NLRP3P1-201ENST00000622303 1785 ntBASIC5.62□□□□□ -1.51
HOXC8P31273 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC8P31273 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
HOXC8P31273 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC8P31273 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXC8P31273 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXC8P31273 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXC8P31273 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXC8P31273 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC8P31273 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HOXC8P31273 MT-RNR1-201ENST00000389680 954 ntBASIC5.62□□□□□ -1.51
HOXC8P31273 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HOXC8P31273 SNORD65-201ENST00000391079 73 ntBASIC5.62□□□□□ -1.51
HOXC8P31273 AC013442.1-201ENST00000397347 228 ntBASIC5.62□□□□□ -1.51
HOXC8P31273 HMGB3P7-201ENST00000400214 611 ntBASIC5.62□□□□□ -1.51
HOXC8P31273 RN7SKP17-201ENST00000411242 351 ntBASIC5.62□□□□□ -1.51
HOXC8P31273 HSPD1P12-201ENST00000429127 1069 ntBASIC5.62□□□□□ -1.51
HOXC8P31273 AC093414.1-201ENST00000434712 514 ntBASIC5.62□□□□□ -1.51
HOXC8P31273 HMGB3P10-201ENST00000434734 572 ntBASIC5.62□□□□□ -1.51
HOXC8P31273 AC099670.2-201ENST00000435130 321 ntBASIC5.62□□□□□ -1.51
HOXC8P31273 AL359265.1-201ENST00000440296 795 ntBASIC5.62□□□□□ -1.51
HOXC8P31273 AC112498.1-201ENST00000444401 332 ntBASIC5.62□□□□□ -1.51
HOXC8P31273 RPL36AP15-201ENST00000444514 266 ntBASIC5.62□□□□□ -1.51
HOXC8P31273 GYG1P1-201ENST00000460864 698 ntBASIC5.62□□□□□ -1.51
HOXC8P31273 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXC8P31273 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXC8P31273 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC8P31273 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC8P31273 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXC8P31273 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.62□□□□□ -1.51
HOXC8P31273 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXC8P31273 AC067805.1-201ENST00000559344 470 ntBASIC5.62□□□□□ -1.51
HOXC8P31273 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.62□□□□□ -1.51
HOXC8P31273 AL391358.1-201ENST00000605342 190 ntBASIC5.62□□□□□ -1.51
HOXC8P31273 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXC8P31273 AC073869.7-201ENST00000640874 297 ntBASIC5.62□□□□□ -1.51
HOXC8P31273 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC8P31273 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC8P31273 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC8P31273 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HOXC8P31273 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
HOXC8P31273 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXC8P31273 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXC8P31273 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXC8P31273 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC8P31273 SDAD1P1-202ENST00000524156 2051 ntBASIC5.62□□□□□ -1.51
HOXC8P31273 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HOXC8P31273 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
HOXC8P31273 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC8P31273 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
HOXC8P31273 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC8P31273 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXC8P31273 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HOXC8P31273 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HOXC8P31273 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC8P31273 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC8P31273 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HOXC8P31273 AC136624.1-201ENST00000400791 413 ntBASIC5.61□□□□□ -1.51
HOXC8P31273 RNA5SP113-201ENST00000410486 84 ntBASIC5.61□□□□□ -1.51
HOXC8P31273 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms