Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 SRRM1P3-201ENST00000426911 2678 ntBASIC5.24□□□□□ -1.57
ABCD3P28288 ADAM24P-201ENST00000398655 2101 ntBASIC5.24□□□□□ -1.57
ABCD3P28288 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
ABCD3P28288 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.24□□□□□ -1.57
ABCD3P28288 AL445437.1-201ENST00000623157 3087 ntBASIC5.24□□□□□ -1.57
ABCD3P28288 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ABCD3P28288 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ABCD3P28288 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
ABCD3P28288 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ABCD3P28288 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ABCD3P28288 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ABCD3P28288 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.23□□□□□ -1.57
ABCD3P28288 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
ABCD3P28288 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
ABCD3P28288 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
ABCD3P28288 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
ABCD3P28288 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
ABCD3P28288 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.23□□□□□ -1.57
ABCD3P28288 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
ABCD3P28288 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
ABCD3P28288 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ABCD3P28288 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.23□□□□□ -1.57
ABCD3P28288 RNA5SP46-201ENST00000362370 120 ntBASIC5.23□□□□□ -1.57
ABCD3P28288 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
ABCD3P28288 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ABCD3P28288 RNU6-317P-201ENST00000384031 107 ntBASIC5.23□□□□□ -1.57
ABCD3P28288 RNU6-98P-201ENST00000384173 107 ntBASIC5.23□□□□□ -1.57
ABCD3P28288 HMGB3P18-201ENST00000406327 590 ntBASIC5.23□□□□□ -1.57
ABCD3P28288 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.23□□□□□ -1.57
ABCD3P28288 VN1R37P-201ENST00000419096 748 ntBASIC5.23□□□□□ -1.57
ABCD3P28288 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.23□□□□□ -1.57
ABCD3P28288 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.23□□□□□ -1.57
ABCD3P28288 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.23□□□□□ -1.57
ABCD3P28288 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.23□□□□□ -1.57
ABCD3P28288 ARL5AP2-201ENST00000444698 533 ntBASIC5.23□□□□□ -1.57
ABCD3P28288 AC005297.1-201ENST00000444765 862 ntBASIC5.23□□□□□ -1.57
ABCD3P28288 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.23□□□□□ -1.57
ABCD3P28288 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.23□□□□□ -1.57
ABCD3P28288 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ABCD3P28288 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.23□□□□□ -1.57
ABCD3P28288 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.23□□□□□ -1.57
ABCD3P28288 GTF2IP12-201ENST00000456547 356 ntBASIC5.23□□□□□ -1.57
ABCD3P28288 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
ABCD3P28288 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.23□□□□□ -1.57
ABCD3P28288 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.23□□□□□ -1.57
ABCD3P28288 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.23□□□□□ -1.57
ABCD3P28288 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.23□□□□□ -1.57
ABCD3P28288 AC011611.5-201ENST00000552477 578 ntBASIC5.23□□□□□ -1.57
ABCD3P28288 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.23□□□□□ -1.57
ABCD3P28288 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.23□□□□□ -1.57
ABCD3P28288 HSPE1P2-201ENST00000554777 306 ntBASIC5.23□□□□□ -1.57
ABCD3P28288 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.23□□□□□ -1.57
ABCD3P28288 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.23□□□□□ -1.57
ABCD3P28288 AC010735.1-201ENST00000567305 1026 ntBASIC5.23□□□□□ -1.57
ABCD3P28288 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.23□□□□□ -1.57
ABCD3P28288 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.23□□□□□ -1.57
ABCD3P28288 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.23□□□□□ -1.57
ABCD3P28288 AC125494.3-201ENST00000602759 455 ntBASIC5.23□□□□□ -1.57
ABCD3P28288 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.23□□□□□ -1.57
ABCD3P28288 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.23□□□□□ -1.57
ABCD3P28288 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.23□□□□□ -1.57
ABCD3P28288 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.23□□□□□ -1.57
ABCD3P28288 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.23□□□□□ -1.57
ABCD3P28288 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.23□□□□□ -1.57
ABCD3P28288 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.23□□□□□ -1.57
ABCD3P28288 AC103703.1-201ENST00000634783 663 ntBASIC5.23□□□□□ -1.57
ABCD3P28288 AC006927.2-201ENST00000639256 389 ntBASIC5.23□□□□□ -1.57
ABCD3P28288 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
ABCD3P28288 AC019072.1-201ENST00000604535 1551 ntBASIC5.23□□□□□ -1.57
ABCD3P28288 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ABCD3P28288 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.23□□□□□ -1.57
ABCD3P28288 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.23□□□□□ -1.57
ABCD3P28288 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
ABCD3P28288 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ABCD3P28288 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.23□□□□□ -1.57
ABCD3P28288 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ABCD3P28288 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ABCD3P28288 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ABCD3P28288 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.23□□□□□ -1.57
ABCD3P28288 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ABCD3P28288 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ABCD3P28288 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ABCD3P28288 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.22□□□□□ -1.57
ABCD3P28288 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
ABCD3P28288 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.22□□□□□ -1.57
ABCD3P28288 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ABCD3P28288 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
ABCD3P28288 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.22□□□□□ -1.57
ABCD3P28288 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.22□□□□□ -1.57
ABCD3P28288 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ABCD3P28288 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ABCD3P28288 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.22□□□□□ -1.57
ABCD3P28288 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ABCD3P28288 RNA5SP131-201ENST00000365452 119 ntBASIC5.22□□□□□ -1.57
ABCD3P28288 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.22□□□□□ -1.57
ABCD3P28288 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ABCD3P28288 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ABCD3P28288 RNU1-136P-201ENST00000384181 164 ntBASIC5.22□□□□□ -1.57
ABCD3P28288 SNORA17A-201ENST00000391185 133 ntBASIC5.22□□□□□ -1.57
ABCD3P28288 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms