Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 BNIP3P35-201ENST00000604530 490 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 AC026979.4-201ENST00000606555 645 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 AC004232.3-201ENST00000622977 525 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 FGG-201ENST00000336098 1659 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.8□□□□□ -1.8
HLA-DQA1P01909 AC007382.1-201ENST00000624376 2618 ntBASIC3.8□□□□□ -1.8
HLA-DQA1P01909 AC106872.5-201ENST00000508856 1416 ntBASIC3.8□□□□□ -1.8
HLA-DQA1P01909 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 RNU1-108P-201ENST00000362556 161 ntBASIC3.8□□□□□ -1.8
HLA-DQA1P01909 MIR195-201ENST00000385194 87 ntBASIC3.8□□□□□ -1.8
HLA-DQA1P01909 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 RCC2P2-201ENST00000422174 918 ntBASIC3.8□□□□□ -1.8
HLA-DQA1P01909 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 OR6D1P-201ENST00000436165 939 ntBASIC3.8□□□□□ -1.8
HLA-DQA1P01909 RPS6P2-201ENST00000454208 705 ntBASIC3.8□□□□□ -1.8
HLA-DQA1P01909 AL035090.1-201ENST00000454835 332 ntBASIC3.8□□□□□ -1.8
HLA-DQA1P01909 RN7SL515P-201ENST00000463999 297 ntBASIC3.8□□□□□ -1.8
HLA-DQA1P01909 OR2A1-AS1-202ENST00000467944 422 ntBASIC3.8□□□□□ -1.8
HLA-DQA1P01909 AC104971.1-201ENST00000495117 578 ntBASIC3.8□□□□□ -1.8
HLA-DQA1P01909 DUBR-205ENST00000495228 411 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 RN7SL558P-201ENST00000497468 299 ntBASIC3.8□□□□□ -1.8
HLA-DQA1P01909 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 MYL12AP1-201ENST00000518490 515 ntBASIC3.8□□□□□ -1.8
HLA-DQA1P01909 IGKV2-4-201ENST00000523070 340 ntBASIC3.8□□□□□ -1.8
HLA-DQA1P01909 AP001804.2-201ENST00000533932 910 ntBASIC3.8□□□□□ -1.8
HLA-DQA1P01909 AP002373.2-201ENST00000541631 1060 ntBASIC3.8□□□□□ -1.8
HLA-DQA1P01909 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 AP001496.3-201ENST00000580230 913 ntBASIC3.8□□□□□ -1.8
HLA-DQA1P01909 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 AC068446.1-201ENST00000556425 1549 ntBASIC3.8□□□□□ -1.8
HLA-DQA1P01909 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HLA-DQA1P01909 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 AC087190.4-201ENST00000574616 8334 ntBASIC3.79□□□□□ -1.8
HLA-DQA1P01909 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 RNU1-20P-201ENST00000363314 162 ntBASIC3.79□□□□□ -1.8
HLA-DQA1P01909 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 AC127526.2-201ENST00000426436 775 ntBASIC3.79□□□□□ -1.8
HLA-DQA1P01909 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 PPIAP13-201ENST00000434706 478 ntBASIC3.79□□□□□ -1.8
HLA-DQA1P01909 AL450263.2-201ENST00000439400 589 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms