Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SSX4O60224 AC068870.1-201ENST00000563737 2455 ntBASIC4.96□□□□□ -1.62
SSX4O60224 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
SSX4O60224 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.96□□□□□ -1.62
SSX4O60224 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSX4O60224 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSX4O60224 OR9K1P-201ENST00000326513 941 ntBASIC4.96□□□□□ -1.62
SSX4O60224 GAPDHP24-201ENST00000328713 983 ntBASIC4.96□□□□□ -1.62
SSX4O60224 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSX4O60224 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSX4O60224 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
SSX4O60224 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSX4O60224 CHMP1B2P-201ENST00000399581 597 ntBASIC4.96□□□□□ -1.62
SSX4O60224 RN7SKP29-201ENST00000410957 272 ntBASIC4.96□□□□□ -1.62
SSX4O60224 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.96□□□□□ -1.62
SSX4O60224 DEFA9P-201ENST00000433042 285 ntBASIC4.96□□□□□ -1.62
SSX4O60224 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.96□□□□□ -1.62
SSX4O60224 RNFT1P2-201ENST00000443064 757 ntBASIC4.96□□□□□ -1.62
SSX4O60224 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.96□□□□□ -1.62
SSX4O60224 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.96□□□□□ -1.62
SSX4O60224 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.96□□□□□ -1.62
SSX4O60224 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.96□□□□□ -1.62
SSX4O60224 HMGB1P5-202ENST00000451497 985 ntBASIC4.96□□□□□ -1.62
SSX4O60224 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.96□□□□□ -1.62
SSX4O60224 AC037198.2-201ENST00000478845 733 ntBASIC4.96□□□□□ -1.62
SSX4O60224 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.96□□□□□ -1.62
SSX4O60224 AC016550.1-201ENST00000505348 785 ntBASIC4.96□□□□□ -1.62
SSX4O60224 DUTP7-201ENST00000507982 486 ntBASIC4.96□□□□□ -1.62
SSX4O60224 AC138866.2-201ENST00000508650 584 ntBASIC4.96□□□□□ -1.62
SSX4O60224 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.96□□□□□ -1.62
SSX4O60224 IGLV3-24-201ENST00000517477 197 ntBASIC4.96□□□□□ -1.62
SSX4O60224 HIGD1AP18-201ENST00000520730 278 ntBASIC4.96□□□□□ -1.62
SSX4O60224 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.96□□□□□ -1.62
SSX4O60224 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.96□□□□□ -1.62
SSX4O60224 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SSX4O60224 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.96□□□□□ -1.62
SSX4O60224 UBTFL9-201ENST00000534504 1148 ntBASIC4.96□□□□□ -1.62
SSX4O60224 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SSX4O60224 AL049872.1-201ENST00000556323 322 ntBASIC4.96□□□□□ -1.62
SSX4O60224 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.96□□□□□ -1.62
SSX4O60224 GARSP1-201ENST00000570895 719 ntBASIC4.96□□□□□ -1.62
SSX4O60224 MIR4260-201ENST00000583107 67 ntBASIC4.96□□□□□ -1.62
SSX4O60224 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.96□□□□□ -1.62
SSX4O60224 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.96□□□□□ -1.62
SSX4O60224 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.96□□□□□ -1.62
SSX4O60224 AC012557.1-201ENST00000607115 611 ntBASIC4.96□□□□□ -1.62
SSX4O60224 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.62
SSX4O60224 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.96□□□□□ -1.62
SSX4O60224 AC074140.1-201ENST00000621617 208 ntBASIC4.96□□□□□ -1.62
SSX4O60224 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.96□□□□□ -1.62
SSX4O60224 AC021106.3-201ENST00000623925 531 ntBASIC4.96□□□□□ -1.62
SSX4O60224 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SSX4O60224 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
SSX4O60224 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
SSX4O60224 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
SSX4O60224 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.96□□□□□ -1.62
SSX4O60224 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.96□□□□□ -1.62
SSX4O60224 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
SSX4O60224 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.96□□□□□ -1.62
SSX4O60224 TTC39DP-201ENST00000416781 1688 ntBASIC4.96□□□□□ -1.62
SSX4O60224 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.96□□□□□ -1.62
SSX4O60224 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.95□□□□□ -1.62
SSX4O60224 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSX4O60224 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SSX4O60224 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSX4O60224 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSX4O60224 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSX4O60224 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSX4O60224 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSX4O60224 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSX4O60224 AP004607.3-201ENST00000530354 3915 ntBASIC4.95□□□□□ -1.62
SSX4O60224 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSX4O60224 RNA5SP132-201ENST00000364725 118 ntBASIC4.95□□□□□ -1.62
SSX4O60224 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSX4O60224 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSX4O60224 AL136131.1-201ENST00000406079 803 ntBASIC4.95□□□□□ -1.62
SSX4O60224 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.95□□□□□ -1.62
SSX4O60224 RNA5SP296-201ENST00000410523 111 ntBASIC4.95□□□□□ -1.62
SSX4O60224 AC096921.1-201ENST00000411661 375 ntBASIC4.95□□□□□ -1.62
SSX4O60224 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.95□□□□□ -1.62
SSX4O60224 AC092570.3-201ENST00000420113 693 ntBASIC4.95□□□□□ -1.62
SSX4O60224 RNGTTP1-201ENST00000420965 728 ntBASIC4.95□□□□□ -1.62
SSX4O60224 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.95□□□□□ -1.62
SSX4O60224 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.95□□□□□ -1.62
SSX4O60224 TNPO1P1-201ENST00000423641 1138 ntBASIC4.95□□□□□ -1.62
SSX4O60224 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.95□□□□□ -1.62
SSX4O60224 MTCO2P1-201ENST00000424648 477 ntBASIC4.95□□□□□ -1.62
SSX4O60224 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.95□□□□□ -1.62
SSX4O60224 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.95□□□□□ -1.62
SSX4O60224 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.95□□□□□ -1.62
SSX4O60224 AL512661.1-201ENST00000434586 1253 ntBASIC4.95□□□□□ -1.62
SSX4O60224 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.95□□□□□ -1.62
SSX4O60224 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.95□□□□□ -1.62
SSX4O60224 AC023141.8-201ENST00000442554 208 ntBASIC4.95□□□□□ -1.62
SSX4O60224 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.95□□□□□ -1.62
SSX4O60224 AC020779.1-201ENST00000478757 796 ntBASIC4.95□□□□□ -1.62
SSX4O60224 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
SSX4O60224 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.95□□□□□ -1.62
SSX4O60224 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.95□□□□□ -1.62
SSX4O60224 MYL12BP2-201ENST00000503948 512 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms