Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RPL23AP2-201ENST00000471227 466 ntBASIC8.53□□□□□ -1.04
CUX2O14529 AC097173.1-201ENST00000505862 819 ntBASIC8.53□□□□□ -1.04
CUX2O14529 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC8.53□□□□□ -1.04
CUX2O14529 AC105129.1-201ENST00000560250 297 ntBASIC8.53□□□□□ -1.04
CUX2O14529 AC025857.2-201ENST00000602711 238 ntBASIC8.53□□□□□ -1.04
CUX2O14529 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC8.53□□□□□ -1.04
CUX2O14529 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC8.53□□□□□ -1.04
CUX2O14529 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
CUX2O14529 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CUX2O14529 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
CUX2O14529 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
CUX2O14529 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
CUX2O14529 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CUX2O14529 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CUX2O14529 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CUX2O14529 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CUX2O14529 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CUX2O14529 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CUX2O14529 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC8.52□□□□□ -1.04
CUX2O14529 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CUX2O14529 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
CUX2O14529 U3.28-201ENST00000391249 210 ntBASIC8.52□□□□□ -1.05
CUX2O14529 AL022722.2-201ENST00000402519 180 ntBASIC8.52□□□□□ -1.05
CUX2O14529 OR2B7P-201ENST00000429302 934 ntBASIC8.52□□□□□ -1.05
CUX2O14529 ARL4AP4-201ENST00000434170 518 ntBASIC8.52□□□□□ -1.05
CUX2O14529 NUTF2P3-201ENST00000448540 384 ntBASIC8.52□□□□□ -1.05
CUX2O14529 TCEA1P1-201ENST00000449716 880 ntBASIC8.52□□□□□ -1.05
CUX2O14529 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC8.52□□□□□ -1.05
CUX2O14529 RPL7P15-201ENST00000461190 712 ntBASIC8.52□□□□□ -1.05
CUX2O14529 AC090589.1-201ENST00000473109 362 ntBASIC8.52□□□□□ -1.05
CUX2O14529 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
CUX2O14529 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC8.52□□□□□ -1.05
CUX2O14529 EIF1P5-201ENST00000585002 234 ntBASIC8.52□□□□□ -1.05
CUX2O14529 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC8.52□□□□□ -1.05
CUX2O14529 AC244100.1-202ENST00000621554 382 ntBASIC8.52□□□□□ -1.05
CUX2O14529 AL021877.2-201ENST00000624442 10684 ntBASIC8.52□□□□□ -1.05
CUX2O14529 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CUX2O14529 OFD1P5Y-201ENST00000447585 2590 ntBASIC8.52□□□□□ -1.05
CUX2O14529 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CUX2O14529 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
CUX2O14529 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CUX2O14529 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CUX2O14529 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC8.52□□□□□ -1.05
CUX2O14529 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CUX2O14529 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CUX2O14529 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC8.52□□□□□ -1.05
CUX2O14529 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CUX2O14529 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CUX2O14529 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC8.51□□□□□ -1.05
CUX2O14529 MIR634-201ENST00000385208 97 ntBASIC8.51□□□□□ -1.05
CUX2O14529 OR8V1P-201ENST00000395193 873 ntBASIC8.51□□□□□ -1.05
CUX2O14529 SNORA77-201ENST00000408716 125 ntBASIC8.51□□□□□ -1.05
CUX2O14529 RPS3AP25-201ENST00000411660 793 ntBASIC8.51□□□□□ -1.05
CUX2O14529 RPL37P1-201ENST00000432310 284 ntBASIC8.51□□□□□ -1.05
CUX2O14529 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC8.51□□□□□ -1.05
CUX2O14529 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC8.51□□□□□ -1.05
CUX2O14529 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC8.51□□□□□ -1.05
CUX2O14529 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC8.51□□□□□ -1.05
CUX2O14529 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC8.51□□□□□ -1.05
CUX2O14529 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC8.51□□□□□ -1.05
CUX2O14529 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC8.51□□□□□ -1.05
CUX2O14529 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC8.51□□□□□ -1.05
CUX2O14529 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CUX2O14529 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
CUX2O14529 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
CUX2O14529 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CUX2O14529 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC8.51□□□□□ -1.05
CUX2O14529 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CUX2O14529 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CUX2O14529 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CUX2O14529 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC8.51□□□□□ -1.05
CUX2O14529 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC8.51□□□□□ -1.05
CUX2O14529 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
CUX2O14529 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CUX2O14529 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC8.51□□□□□ -1.05
CUX2O14529 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CUX2O14529 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC8.51□□□□□ -1.05
CUX2O14529 AC245028.2-201ENST00000458673 253 ntBASIC8.51□□□□□ -1.05
CUX2O14529 RPL7P41-201ENST00000485823 957 ntBASIC8.51□□□□□ -1.05
CUX2O14529 RN7SL814P-201ENST00000487715 300 ntBASIC8.51□□□□□ -1.05
CUX2O14529 RGS5-218ENST00000526176 574 ntTSL 4 BASIC8.51□□□□□ -1.05
CUX2O14529 HNRNPRP2-201ENST00000528421 743 ntBASIC8.51□□□□□ -1.05
CUX2O14529 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC8.51□□□□□ -1.05
CUX2O14529 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CUX2O14529 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
CUX2O14529 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC8.51□□□□□ -1.05
CUX2O14529 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC8.51□□□□□ -1.05
CUX2O14529 AC100847.1-201ENST00000611316 481 ntBASIC8.51□□□□□ -1.05
CUX2O14529 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CUX2O14529 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CUX2O14529 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC8.5□□□□□ -1.05
CUX2O14529 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CUX2O14529 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC8.5□□□□□ -1.05
CUX2O14529 MAPK10-270ENST00000641102 3538 ntBASIC8.5□□□□□ -1.05
CUX2O14529 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CUX2O14529 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC8.5□□□□□ -1.05
CUX2O14529 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC8.5□□□□□ -1.05
CUX2O14529 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC8.5□□□□□ -1.05
CUX2O14529 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CUX2O14529 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC8.5□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms