Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.96□□□□□ -1.62
SLC28A1O00337 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.96□□□□□ -1.62
SLC28A1O00337 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC28A1O00337 MIR1910-201ENST00000636955 80 ntBASIC4.96□□□□□ -1.62
SLC28A1O00337 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
SLC28A1O00337 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SLC28A1O00337 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SLC28A1O00337 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SLC28A1O00337 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SLC28A1O00337 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.96□□□□□ -1.62
SLC28A1O00337 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SLC28A1O00337 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
SLC28A1O00337 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SLC28A1O00337 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.95□□□□□ -1.62
SLC28A1O00337 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SLC28A1O00337 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SLC28A1O00337 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.95□□□□□ -1.62
SLC28A1O00337 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SLC28A1O00337 U3.32-201ENST00000408116 212 ntBASIC4.95□□□□□ -1.62
SLC28A1O00337 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.95□□□□□ -1.62
SLC28A1O00337 RN7SKP293-201ENST00000411389 296 ntBASIC4.95□□□□□ -1.62
SLC28A1O00337 NPM1P40-201ENST00000412758 733 ntBASIC4.95□□□□□ -1.62
SLC28A1O00337 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC28A1O00337 AL445528.1-201ENST00000426330 420 ntBASIC4.95□□□□□ -1.62
SLC28A1O00337 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SLC28A1O00337 RPS4XP16-201ENST00000427198 791 ntBASIC4.95□□□□□ -1.62
SLC28A1O00337 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.95□□□□□ -1.62
SLC28A1O00337 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.95□□□□□ -1.62
SLC28A1O00337 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.95□□□□□ -1.62
SLC28A1O00337 AC093716.1-201ENST00000435923 377 ntBASIC4.95□□□□□ -1.62
SLC28A1O00337 AC114878.1-201ENST00000441166 358 ntBASIC4.95□□□□□ -1.62
SLC28A1O00337 AC020779.1-201ENST00000478757 796 ntBASIC4.95□□□□□ -1.62
SLC28A1O00337 RN7SL547P-201ENST00000490793 290 ntBASIC4.95□□□□□ -1.62
SLC28A1O00337 AC073073.1-201ENST00000493920 463 ntBASIC4.95□□□□□ -1.62
SLC28A1O00337 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.95□□□□□ -1.62
SLC28A1O00337 RPS4XP20-201ENST00000505751 772 ntBASIC4.95□□□□□ -1.62
SLC28A1O00337 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.95□□□□□ -1.62
SLC28A1O00337 GTF2F2P1-201ENST00000511083 675 ntBASIC4.95□□□□□ -1.62
SLC28A1O00337 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.95□□□□□ -1.62
SLC28A1O00337 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.95□□□□□ -1.62
SLC28A1O00337 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SLC28A1O00337 AC126177.5-201ENST00000549599 178 ntBASIC4.95□□□□□ -1.62
SLC28A1O00337 AC087888.1-201ENST00000550884 1254 ntBASIC4.95□□□□□ -1.62
SLC28A1O00337 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC28A1O00337 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC28A1O00337 AC018552.1-201ENST00000562099 811 ntBASIC4.95□□□□□ -1.62
SLC28A1O00337 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SLC28A1O00337 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.95□□□□□ -1.62
SLC28A1O00337 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC28A1O00337 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC28A1O00337 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.95□□□□□ -1.62
SLC28A1O00337 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.95□□□□□ -1.62
SLC28A1O00337 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.95□□□□□ -1.62
SLC28A1O00337 AC008521.2-201ENST00000591021 259 ntBASIC4.95□□□□□ -1.62
SLC28A1O00337 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.95□□□□□ -1.62
SLC28A1O00337 AC019080.5-201ENST00000624891 757 ntBASIC4.95□□□□□ -1.62
SLC28A1O00337 OR8A1-204ENST00000642111 1145 ntBASIC4.95□□□□□ -1.62
SLC28A1O00337 VPS35P1-201ENST00000563400 1518 ntBASIC4.95□□□□□ -1.62
SLC28A1O00337 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SLC28A1O00337 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SLC28A1O00337 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SLC28A1O00337 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SLC28A1O00337 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SLC28A1O00337 AC007996.1-201ENST00000620414 2821 ntBASIC4.95□□□□□ -1.62
SLC28A1O00337 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SLC28A1O00337 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SLC28A1O00337 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SLC28A1O00337 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SLC28A1O00337 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SLC28A1O00337 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SLC28A1O00337 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
SLC28A1O00337 UGT2B26P-201ENST00000508672 1613 ntBASIC4.94□□□□□ -1.62
SLC28A1O00337 AC110792.3-201ENST00000595906 1614 ntBASIC4.94□□□□□ -1.62
SLC28A1O00337 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.94□□□□□ -1.62
SLC28A1O00337 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SLC28A1O00337 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.94□□□□□ -1.62
SLC28A1O00337 RN7SKP113-201ENST00000363891 295 ntBASIC4.94□□□□□ -1.62
SLC28A1O00337 SNORA67-201ENST00000384423 137 ntBASIC4.94□□□□□ -1.62
SLC28A1O00337 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SLC28A1O00337 OOSP1-201ENST00000398992 1270 ntBASIC4.94□□□□□ -1.62
SLC28A1O00337 AL136116.2-201ENST00000404020 785 ntBASIC4.94□□□□□ -1.62
SLC28A1O00337 NUDT19P3-201ENST00000404698 555 ntBASIC4.94□□□□□ -1.62
SLC28A1O00337 AL136131.1-201ENST00000406079 803 ntBASIC4.94□□□□□ -1.62
SLC28A1O00337 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.94□□□□□ -1.62
SLC28A1O00337 OR51A6P-201ENST00000418680 1004 ntBASIC4.94□□□□□ -1.62
SLC28A1O00337 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.94□□□□□ -1.62
SLC28A1O00337 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.94□□□□□ -1.62
SLC28A1O00337 RPL23AP4-201ENST00000427757 463 ntBASIC4.94□□□□□ -1.62
SLC28A1O00337 KCTD9P1-201ENST00000430462 1167 ntBASIC4.94□□□□□ -1.62
SLC28A1O00337 AC007563.3-201ENST00000433233 371 ntBASIC4.94□□□□□ -1.62
SLC28A1O00337 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.94□□□□□ -1.62
SLC28A1O00337 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.94□□□□□ -1.62
SLC28A1O00337 MTND3P4-201ENST00000453537 303 ntBASIC4.94□□□□□ -1.62
SLC28A1O00337 Z92846.1-201ENST00000456203 268 ntBASIC4.94□□□□□ -1.62
SLC28A1O00337 PPIAP19-201ENST00000486414 492 ntBASIC4.94□□□□□ -1.62
SLC28A1O00337 RN7SL441P-201ENST00000492388 296 ntBASIC4.94□□□□□ -1.62
SLC28A1O00337 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SLC28A1O00337 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.94□□□□□ -1.62
SLC28A1O00337 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.94□□□□□ -1.62
SLC28A1O00337 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms