Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 Y_RNA.719-201ENST00000517156 106 ntBASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 AL049779.2-201ENST00000553847 315 ntBASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 NMNAT1P1-201ENST00000554095 876 ntBASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 AL390726.5-202ENST00000564800 256 ntBASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 AC097505.1-201ENST00000610199 565 ntBASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 AC004477.3-201ENST00000614061 590 ntBASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 AC139713.2-215ENST00000641428 5037 ntBASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 MAPK10-349ENST00000641767 3661 ntBASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 RNA5SP242-201ENST00000364171 118 ntBASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 SETP15-201ENST00000412724 337 ntBASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 FABP7P1-201ENST00000424004 391 ntBASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 RPS26P2-201ENST00000440331 348 ntBASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 RPL34P20-201ENST00000442771 351 ntBASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 OR7E125P-201ENST00000443450 846 ntBASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 TDGF1P1-201ENST00000445734 527 ntBASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 AC000111.2-201ENST00000448200 210 ntBASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 AC023141.9-201ENST00000458734 412 ntBASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 RN7SL717P-201ENST00000478343 297 ntBASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 RN7SL346P-201ENST00000491561 294 ntBASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 RNU6-1334P-201ENST00000516032 105 ntBASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 RN7SKP260-201ENST00000516907 149 ntBASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 FKBP1AP1-201ENST00000594588 318 ntBASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 SNORD91B-202ENST00000608459 222 ntBASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 AC079395.2-201ENST00000610982 737 ntBASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 MIR6837-201ENST00000620884 64 ntBASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 AC099494.2-201ENST00000623371 978 ntBASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 AC008758.3-201ENST00000507003 1829 ntBASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM49D1C9J1S8 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 RNA5SP132-201ENST00000364725 118 ntBASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 SNORD96B-201ENST00000386148 79 ntBASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 AL513325.1-201ENST00000417716 1034 ntBASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 AC108693.1-201ENST00000496068 432 ntBASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 RNA5SP362-201ENST00000516048 118 ntBASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 RNU6-709P-201ENST00000517257 104 ntBASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 EIF4EP5-201ENST00000528228 640 ntBASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 SNORA74C-1-201ENST00000580726 201 ntBASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 AC006272.2-201ENST00000594725 163 ntBASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 AP002505.2-201ENST00000623585 696 ntBASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 NR1H5P-201ENST00000452683 1377 ntBASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 PROS2P-201ENST00000474651 1951 ntBASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 CASC19-281ENST00000642118 1554 ntBASIC4.87□□□□□ -1.63
TRIM49D1C9J1S8 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms