Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 SNORA35B-201ENST00000607417 129 ntBASIC3.99□□□□□ -1.77
RBFOX3A6NFN3 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.99□□□□□ -1.77
RBFOX3A6NFN3 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC3.99□□□□□ -1.77
RBFOX3A6NFN3 AC005086.4-201ENST00000623065 213 ntBASIC3.99□□□□□ -1.77
RBFOX3A6NFN3 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RBFOX3A6NFN3 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RBFOX3A6NFN3 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
RBFOX3A6NFN3 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RBFOX3A6NFN3 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RBFOX3A6NFN3 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
RBFOX3A6NFN3 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 IRF5P1-201ENST00000504852 2164 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 TMSB4XP2-201ENST00000335179 210 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 RNU1-20P-201ENST00000363314 162 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 RNA5SP131-201ENST00000365452 119 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 SNORA66-201ENST00000384792 133 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 SNORA68.2-201ENST00000391263 128 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 VN1R3-201ENST00000418822 919 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 AC013470.3-201ENST00000420252 1194 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 PDSS1P1-201ENST00000422953 1114 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 PPIAP13-201ENST00000434706 478 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 GSTM5P1-201ENST00000434751 660 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 RPL12P11-201ENST00000439970 501 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 CST12P-201ENST00000457644 362 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 NDUFA5P5-201ENST00000468361 342 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 RN7SL41P-201ENST00000476144 297 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 RN7SL441P-201ENST00000492388 296 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 LSM3P4-201ENST00000502948 309 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 AC097173.1-201ENST00000505862 819 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 HMGB1P44-201ENST00000508597 572 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 LDHAP1-201ENST00000509421 992 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 MRPS16P1-201ENST00000523462 412 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 AC005363.1-201ENST00000530779 351 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 AC079075.1-201ENST00000559543 878 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 AC005726.4-201ENST00000582858 458 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 AC091979.2-201ENST00000607514 214 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 AC004241.3-201ENST00000611728 517 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 AL096712.1-201ENST00000614561 159 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 AC004232.3-201ENST00000622977 525 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 SAMMSON-209ENST00000641222 1100 ntBASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC3.98□□□□□ -1.77
RBFOX3A6NFN3 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 SLC9B1P1-201ENST00000331172 1337 ntBASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 AC107027.3-201ENST00000565095 3473 ntBASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 AL121834.1-202ENST00000404494 277 ntBASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 QRSL1P2-201ENST00000418582 964 ntBASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 EIF4EP1-201ENST00000422311 642 ntBASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 BX323845.3-201ENST00000428215 527 ntBASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 HMGN1P2-201ENST00000445197 310 ntBASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms