Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.4□□□□□ -1.55
TCRBV7S3A2A0A539 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
TCRBV7S3A2A0A539 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.4□□□□□ -1.55
TCRBV7S3A2A0A539 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
TCRBV7S3A2A0A539 MTND5P23-201ENST00000430812 1655 ntBASIC5.4□□□□□ -1.55
TCRBV7S3A2A0A539 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
TCRBV7S3A2A0A539 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.4□□□□□ -1.55
TCRBV7S3A2A0A539 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
TCRBV7S3A2A0A539 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
TCRBV7S3A2A0A539 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TCRBV7S3A2A0A539 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.4□□□□□ -1.55
TCRBV7S3A2A0A539 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 AC023490.2-201ENST00000359859 470 ntBASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 RNU6-468P-201ENST00000384003 109 ntBASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 AL355615.1-201ENST00000406187 641 ntBASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 AC012075.1-201ENST00000436549 580 ntBASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 AC084754.1-201ENST00000463466 464 ntBASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 AC021660.1-201ENST00000465006 554 ntBASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 RPS17P11-201ENST00000474297 293 ntBASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 RPS24P16-201ENST00000497294 392 ntBASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 AC090638.1-201ENST00000498296 909 ntBASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 UBE2V1P12-201ENST00000503954 474 ntBASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 AC069306.1-201ENST00000507006 843 ntBASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 RNA5SP373-201ENST00000517271 95 ntBASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 BUD31P1-201ENST00000521828 359 ntBASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 AC138832.1-201ENST00000522871 556 ntBASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 HAUS1P3-201ENST00000523909 662 ntBASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 YWHABP2-201ENST00000540201 713 ntBASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 BLZF2P-201ENST00000553776 1130 ntBASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 AC011492.1-201ENST00000600023 315 ntBASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 AC013244.3-201ENST00000605614 388 ntBASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 AL121652.1-201ENST00000608851 448 ntBASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 AC109809.1-201ENST00000619665 545 ntBASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 GVINP1-202ENST00000531871 7271 ntBASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 AC114947.2-201ENST00000565748 2125 ntBASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 MAPK10-338ENST00000641647 3362 ntBASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TCRBV7S3A2A0A539 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 AC011503.2-201ENST00000594230 1500 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 AP005432.1-201ENST00000580891 3485 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 AL672167.2-201ENST00000377164 879 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 RNA5SP284-201ENST00000384547 118 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 RNU6-796P-201ENST00000391086 107 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 HMGB1P10-201ENST00000395823 563 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 RPL21P67-201ENST00000402896 478 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 RNU2-17P-201ENST00000410290 190 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms