Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AF129408.1-201ENST00000608767 431 ntBASIC5.48□□□□□ -1.53
RAI2Q9Y5P3 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.48□□□□□ -1.53
RAI2Q9Y5P3 MIR6133-201ENST00000617057 108 ntBASIC5.48□□□□□ -1.53
RAI2Q9Y5P3 AC079298.2-201ENST00000623885 459 ntBASIC5.48□□□□□ -1.53
RAI2Q9Y5P3 AC090506.2-201ENST00000624521 419 ntBASIC5.48□□□□□ -1.53
RAI2Q9Y5P3 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.48□□□□□ -1.53
RAI2Q9Y5P3 AC063952.1-203ENST00000634410 658 ntBASIC5.48□□□□□ -1.53
RAI2Q9Y5P3 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.48□□□□□ -1.53
RAI2Q9Y5P3 AL353796.1-201ENST00000561542 3241 ntBASIC5.48□□□□□ -1.53
RAI2Q9Y5P3 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.48□□□□□ -1.53
RAI2Q9Y5P3 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
RAI2Q9Y5P3 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RAI2Q9Y5P3 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RAI2Q9Y5P3 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RAI2Q9Y5P3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RAI2Q9Y5P3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RAI2Q9Y5P3 AC092451.3-201ENST00000625067 1343 ntBASIC5.48□□□□□ -1.53
RAI2Q9Y5P3 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 MIR133B-201ENST00000362210 119 ntBASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 RNA5SP335-201ENST00000363817 110 ntBASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 RNU1-77P-201ENST00000390868 162 ntBASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 AL035419.1-201ENST00000397037 564 ntBASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 ST13P16-201ENST00000401760 781 ntBASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 UBE2D3P3-201ENST00000426992 425 ntBASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 BX276092.6-201ENST00000430476 250 ntBASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 MTCO1P45-201ENST00000431457 267 ntBASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 ZNF965P-201ENST00000432501 817 ntBASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 CYCSP12-201ENST00000437729 300 ntBASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 BX276092.8-201ENST00000455722 250 ntBASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 AC104629.2-201ENST00000468627 598 ntBASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 AC092754.1-201ENST00000472975 479 ntBASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 AC034244.2-201ENST00000514668 858 ntBASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 OR11H3P-201ENST00000554547 982 ntBASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 SS18L2P2-201ENST00000583960 235 ntBASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 AC090912.3-201ENST00000609775 533 ntBASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 AC005156.1-201ENST00000613371 573 ntBASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 AC135068.5-201ENST00000624197 983 ntBASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 AL445984.1-201ENST00000637834 659 ntBASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 CASC19-261ENST00000641853 1638 ntBASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RAI2Q9Y5P3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
RAI2Q9Y5P3 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
RAI2Q9Y5P3 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
RAI2Q9Y5P3 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
RAI2Q9Y5P3 AC100757.1-201ENST00000616872 1835 ntBASIC5.46□□□□□ -1.53
RAI2Q9Y5P3 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
RAI2Q9Y5P3 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RAI2Q9Y5P3 SAMM50P1-201ENST00000455403 1399 ntBASIC5.46□□□□□ -1.54
RAI2Q9Y5P3 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.46□□□□□ -1.54
RAI2Q9Y5P3 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.46□□□□□ -1.54
RAI2Q9Y5P3 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RAI2Q9Y5P3 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
RAI2Q9Y5P3 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.46□□□□□ -1.54
RAI2Q9Y5P3 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RAI2Q9Y5P3 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RAI2Q9Y5P3 SNORA70.6-201ENST00000383934 134 ntBASIC5.46□□□□□ -1.54
RAI2Q9Y5P3 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.46□□□□□ -1.54
RAI2Q9Y5P3 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.46□□□□□ -1.54
RAI2Q9Y5P3 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.46□□□□□ -1.54
RAI2Q9Y5P3 COX6CP17-201ENST00000421389 185 ntBASIC5.46□□□□□ -1.54
RAI2Q9Y5P3 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.46□□□□□ -1.54
RAI2Q9Y5P3 AC005033.1-201ENST00000428904 813 ntBASIC5.46□□□□□ -1.54
RAI2Q9Y5P3 MRPL50P1-201ENST00000431951 384 ntBASIC5.46□□□□□ -1.54
RAI2Q9Y5P3 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.46□□□□□ -1.54
RAI2Q9Y5P3 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.46□□□□□ -1.54
RAI2Q9Y5P3 CYCSP6-201ENST00000434498 302 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms