Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 AC016831.4-201ENST00000438302 307 ntBASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 snoU13.22-201ENST00000459428 104 ntBASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 AC013356.1-201ENST00000489027 564 ntBASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 ENPP7P11-201ENST00000505915 627 ntBASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 AL049839.1-201ENST00000556151 657 ntBASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 AL356218.2-201ENST00000605264 187 ntBASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 SSX9-202ENST00000608568 580 ntTSL 4 BASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 AL591135.1-201ENST00000401578 5914 ntBASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
SHANK2Q9UPX8 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK2Q9UPX8 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK2Q9UPX8 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC7.31□□□□□ -1.24
SHANK2Q9UPX8 RNA5SP397-201ENST00000391323 118 ntBASIC7.31□□□□□ -1.24
SHANK2Q9UPX8 RPL23AP1-201ENST00000428990 471 ntBASIC7.31□□□□□ -1.24
SHANK2Q9UPX8 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK2Q9UPX8 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK2Q9UPX8 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
SHANK2Q9UPX8 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC7.31□□□□□ -1.24
SHANK2Q9UPX8 MIR5699-201ENST00000578903 90 ntBASIC7.31□□□□□ -1.24
SHANK2Q9UPX8 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK2Q9UPX8 MIR6716-201ENST00000613413 80 ntBASIC7.31□□□□□ -1.24
SHANK2Q9UPX8 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC7.31□□□□□ -1.24
SHANK2Q9UPX8 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK2Q9UPX8 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK2Q9UPX8 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC7.31□□□□□ -1.24
SHANK2Q9UPX8 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
SHANK2Q9UPX8 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK2Q9UPX8 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK2Q9UPX8 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK2Q9UPX8 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK2Q9UPX8 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK2Q9UPX8 OR4K15-201ENST00000305051 1216 ntBASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 MIR298-201ENST00000401212 88 ntBASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 LINC00993-201ENST00000420453 540 ntBASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 AL158073.1-201ENST00000426848 1104 ntBASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 NPM1P33-201ENST00000438918 872 ntBASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 AC004980.3-201ENST00000447046 365 ntBASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 RN7SL517P-201ENST00000462240 305 ntBASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 AC133555.2-201ENST00000550213 292 ntBASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 AC093227.2-201ENST00000589357 285 ntBASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 AL049794.2-201ENST00000616301 365 ntBASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 IPO5-229ENST00000631030 192 ntTSL 5 BASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 AL442639.1-201ENST00000625030 1899 ntBASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 MTCO1P15-201ENST00000529569 1526 ntBASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 AC068446.1-201ENST00000556425 1549 ntBASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 AL359837.1-201ENST00000381357 287 ntBASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 AL359073.1-201ENST00000448036 403 ntBASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 NIP7P2-201ENST00000485801 544 ntBASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 AC025674.1-201ENST00000507074 324 ntBASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 TBCA-207ENST00000520039 157 ntTSL 3 BASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 VN1R85P-201ENST00000601587 426 ntBASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 LDHA-225ENST00000625635 141 ntTSL 5 BASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
SHANK2Q9UPX8 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 AC009643.2-201ENST00000603543 1448 ntBASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 AL137100.1-201ENST00000556703 1620 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms