Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 RPL7P40-201ENST00000481703 745 ntBASIC4.75□□□□□ -1.65
CCDC88CQ9P219 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 OR51A1P-201ENST00000511110 946 ntBASIC4.75□□□□□ -1.65
CCDC88CQ9P219 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 AC011755.1-201ENST00000623763 2049 ntBASIC4.75□□□□□ -1.65
CCDC88CQ9P219 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC88CQ9P219 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC88CQ9P219 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC88CQ9P219 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CCDC88CQ9P219 CHMP1B2P-201ENST00000399581 597 ntBASIC4.74□□□□□ -1.65
CCDC88CQ9P219 RPL26P29-201ENST00000415623 438 ntBASIC4.74□□□□□ -1.65
CCDC88CQ9P219 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC88CQ9P219 AC073052.1-201ENST00000440417 714 ntBASIC4.74□□□□□ -1.65
CCDC88CQ9P219 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC88CQ9P219 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC88CQ9P219 CBX1P2-201ENST00000453841 458 ntBASIC4.74□□□□□ -1.65
CCDC88CQ9P219 AC025164.1-201ENST00000496249 478 ntBASIC4.74□□□□□ -1.65
CCDC88CQ9P219 AC010350.1-201ENST00000504908 231 ntBASIC4.74□□□□□ -1.65
CCDC88CQ9P219 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC88CQ9P219 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC88CQ9P219 AL049839.1-201ENST00000556151 657 ntBASIC4.74□□□□□ -1.65
CCDC88CQ9P219 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC4.74□□□□□ -1.65
CCDC88CQ9P219 AC079075.1-201ENST00000559543 878 ntBASIC4.74□□□□□ -1.65
CCDC88CQ9P219 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC88CQ9P219 AP001521.2-201ENST00000608772 546 ntBASIC4.74□□□□□ -1.65
CCDC88CQ9P219 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
CCDC88CQ9P219 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC88CQ9P219 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC88CQ9P219 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC88CQ9P219 ZNF652P1-201ENST00000442420 1309 ntBASIC4.74□□□□□ -1.65
CCDC88CQ9P219 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC88CQ9P219 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC88CQ9P219 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC88CQ9P219 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC88CQ9P219 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CCDC88CQ9P219 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC88CQ9P219 AC011447.7-201ENST00000624228 1590 ntBASIC4.74□□□□□ -1.65
CCDC88CQ9P219 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 RNA5SP443-201ENST00000363083 132 ntBASIC4.73□□□□□ -1.65
CCDC88CQ9P219 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 U3.30-201ENST00000391308 210 ntBASIC4.73□□□□□ -1.65
CCDC88CQ9P219 RGS17P1-201ENST00000423358 553 ntBASIC4.73□□□□□ -1.65
CCDC88CQ9P219 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 SCAND3P1-201ENST00000439854 1060 ntBASIC4.73□□□□□ -1.65
CCDC88CQ9P219 AL136455.1-201ENST00000441083 1240 ntBASIC4.73□□□□□ -1.65
CCDC88CQ9P219 NDUFA5P8-201ENST00000449019 346 ntBASIC4.73□□□□□ -1.65
CCDC88CQ9P219 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 AL591473.1-201ENST00000464297 313 ntBASIC4.73□□□□□ -1.65
CCDC88CQ9P219 AC069304.1-201ENST00000491593 704 ntBASIC4.73□□□□□ -1.65
CCDC88CQ9P219 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 AC005000.1-201ENST00000536192 288 ntBASIC4.73□□□□□ -1.65
CCDC88CQ9P219 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 AC005084.1-201ENST00000605160 304 ntBASIC4.73□□□□□ -1.65
CCDC88CQ9P219 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.73□□□□□ -1.65
CCDC88CQ9P219 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 MIPEPP2-201ENST00000422560 1819 ntBASIC4.73□□□□□ -1.65
CCDC88CQ9P219 AL590240.1-201ENST00000334118 313 ntBASIC4.73□□□□□ -1.65
CCDC88CQ9P219 RN7SKP153-201ENST00000365026 316 ntBASIC4.73□□□□□ -1.65
CCDC88CQ9P219 RNA5SP223-201ENST00000365174 120 ntBASIC4.73□□□□□ -1.65
CCDC88CQ9P219 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 AL390316.1-201ENST00000406279 553 ntBASIC4.73□□□□□ -1.65
CCDC88CQ9P219 NPM1P40-201ENST00000412758 733 ntBASIC4.73□□□□□ -1.65
CCDC88CQ9P219 OR2B7P-201ENST00000429302 934 ntBASIC4.73□□□□□ -1.65
CCDC88CQ9P219 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 AL137845.2-201ENST00000444292 988 ntBASIC4.73□□□□□ -1.65
CCDC88CQ9P219 RNA5SP103-201ENST00000459503 118 ntBASIC4.73□□□□□ -1.65
CCDC88CQ9P219 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 AC006349.1-201ENST00000555526 235 ntBASIC4.73□□□□□ -1.65
CCDC88CQ9P219 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 LSM1P2-201ENST00000604911 322 ntBASIC4.73□□□□□ -1.65
CCDC88CQ9P219 AP005131.7-201ENST00000610087 611 ntBASIC4.73□□□□□ -1.65
CCDC88CQ9P219 MIR6820-201ENST00000611508 62 ntBASIC4.73□□□□□ -1.65
CCDC88CQ9P219 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms